Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g00490 ATGGCGACGGAGTCTTTTAGAATGACGGCAGCTTCAGCTTCCTCTCTCCGTAATATCAATGGGTCTCAGAGGAGGCCAACCCCTCTCTCTCCACTCCATTTCATGGGTGTTCGACCTCGACCCTCTCGTTCTCTTACTTCGTCTTCCCTTTCTCAGTTCTTTGGAACTTCTCCAATTAAGTCTAAATCTTCCCAACTCCCTTATGTGCGCCACCAGAGCAGAAGAAACTTTTCTGTTTTCGCCATGGCTGCTGAAGATGCAAGTCGAGCTGTTCCGTTGAAAGATTATCGCAACATTGGAATCATGGCACACATTGATGCTGGAAAGACAACCACGACTGAAAGAATTCTCTTCTATACAGGAAGAAACTACAAAATTGGTGAAGTACATGAGGGAACAGCTACCATGGACTGGATGGAACAAGAACAAGAAAGAGGGATTACTATAACTTCTGCTGCAACCACCACATTTTGGAATAATCACCGGATCAACATCATTGACACTCCCGGTCATGTTGACTTCACCCTCGAAGTGGAGCGGGCTCTTAGGGTGCTAGATGGAGCCATATGCTTATTTGATAGTGTTGCTGGTGTGGAACCACAGTCAGAAACTGTGTGGAGACAAGCTGATAAATATGGGGTGCCACGTATTTGTTTTGTTAATAAGATGGACCGTCTTGGAGCTAACTTTTTCCGAACAAGAGATATGATAGTGACAAACTTGGGTGCTAAACCACTTGTAATTCAGATTCCAATTGGTTCGGAAGACAACTTTCAGGGAGTTGTTGATCTTGTAAAAATGAAAGCTATAGTTTGGTCTGGAGAAGAGTTAGGTGCCAAGTTTTCTTATGAAGATATTCCGGATGATCTTCAAGAGTTGGCTCAGGATTATCGATCCCAGATGATTGAAACAATAGTTGAGTTGGATGATCAAGCCATGGAGGCCTATCTAGAAGGAAATGAGCCAGATGAGCAAACCATCAAGAAATTAATTAGGAAGGGAACCTTATCAGGAAAATTTGTCCCAGTCCTGTGTGGCTCAGCTTTCAAAAACAAGGGGGTTCAACCTCTGCTTGATGCTGTTGTGGATTATCTCCCATCACCAATTGAGTTGCCACCAATGAAAGGAACTGACCCTGAAAACCCTGAAGTGATAATAGAAAGGAAAGCAAGTGATGATGAGCCATTTTCTGGATTAGCTTTCAAGATCATGAGCGATACATTTGTCGGTTCCCTTACGTTTGTGAGGGTGTATTCTGGAAAGCTAACTGCAGGATCTTATGTAGTCAATGCAAACAAAGGGAAGAAGGAGAGAATTGGTAGACTGCTGGAAATGCATGCCAACAGCAGGGAGGATGTTAAAGTAGCTTTAACAGGCGATATTGTTGCTCTTGCAGGTTTAAAAGATACTATTACAGGTGAAACATTGAGTGACCCTAATAATCCTGTTGTGCTTGAGCGCATGGACTTTCCTGATCCTGTGATAAAGGTTGCCATTGAGCCCAAAACTAAAGCTGATGTTGACAAGATGGCAACTGGTTTAGTTAAGCTTGCCCAAGAAGACCCTTCTTTCCACTTCTCTAGGGATGAAGAGGTTAACCAGACGGTGATTGAAGGAATGGGAGAATTGCATCTTGAAATCATTGTTGATCGACTCAAGAGAGAATTTAAGGTGGAAGCTAATGTTGGTGCACCCCAAGTGAACTACAGGGAAAGCATTTCCAAAGTCTCAGAAGTGAAGTATGTGCACAAGAAACAGTCAGGAGGACAAGGTCAATTTGCTGATATCACTGTTCGTTTTGAACCCTTGGAGGAAGGTACTGGGTATGAGTTCAAGAGTGAGATCAAAGGAGGTGCTATACCTAAAGAGTACATTCCGGGAGTGATGAAGGGATTGGAGGAGTGTATGAGCAACGGGATACTTGCTGGATTTCCGGTAGTTGGCGTGCGTGCAATACTTGTAGATGGATCTTACCATGATGTAGATTCAAGTGTCCTGGCCTTCCAGTTGGCGGCGAGAGGAGCTTTCCGGGATGGAATGAGAAAAGCAGGACCAAAGATGCTTGAACCAGTCATGAAAGTTGAAGTGGTTACTCCTGAAGAGCATCTAGGAGATGTAATTGGTGATCTCAACTCAAGAAGAGGTCAAATCAACAGTTTTGGTGACAAGCCTGGTGGCCTAAAGGTGGTTGATTCTCTGGTTCCTCTTGCTGAGATGTTTCAGTATGTGAGTACACTGAGGGGGATGACCAAGGGACGTGCGTCTTACACAATGCAATTAGCCAAGTTTGAGATTGTGCCTCAGCACATCCAAAACCAACTCTCCTCGAAGGAGCAAGAAGTTGCTGCTTAA 2352 0.4409 MATESFRMTAASASSLRNINGSQRRPTPLSPLHFMGVRPRPSRSLTSSSLSQFFGTSPIKSKSSQLPYVRHQSRRNFSVFAMAAEDASRAVPLKDYRNIGIMAHIDAGKTTTTERILFYTGRNYKIGEVHEGTATMDWMEQEQERGITITSAATTTFWNNHRINIIDTPGHVDFTLEVERALRVLDGAICLFDSVAGVEPQSETVWRQADKYGVPRICFVNKMDRLGANFFRTRDMIVTNLGAKPLVIQIPIGSEDNFQGVVDLVKMKAIVWSGEELGAKFSYEDIPDDLQELAQDYRSQMIETIVELDDQAMEAYLEGNEPDEQTIKKLIRKGTLSGKFVPVLCGSAFKNKGVQPLLDAVVDYLPSPIELPPMKGTDPENPEVIIERKASDDEPFSGLAFKIMSDTFVGSLTFVRVYSGKLTAGSYVVNANKGKKERIGRLLEMHANSREDVKVALTGDIVALAGLKDTITGETLSDPNNPVVLERMDFPDPVIKVAIEPKTKADVDKMATGLVKLAQEDPSFHFSRDEEVNQTVIEGMGELHLEIIVDRLKREFKVEANVGAPQVNYRESISKVSEVKYVHKKQSGGQGQFADITVRFEPLEEGTGYEFKSEIKGGAIPKEYIPGVMKGLEECMSNGILAGFPVVGVRAILVDGSYHDVDSSVLAFQLAARGAFRDGMRKAGPKMLEPVMKVEVVTPEEHLGDVIGDLNSRRGQINSFGDKPGGLKVVDSLVPLAEMFQYVSTLRGMTKGRASYTMQLAKFEIVPQHIQNQLSSKEQEVAA 783
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g00490 783 CDD EFG_mtEFG_II 396 478 - -
Accr10g00490 783 MobiDBLite consensus disorder prediction 13 49 - -
Accr10g00490 783 Pfam Elongation factor G C-terminus 687 773 IPR000640 -
Accr10g00490 783 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 137 152 IPR031157 -
Accr10g00490 783 PRINTS GTP-binding elongation factor signature 144 152 IPR000795 GO:0003924|GO:0005525
Accr10g00490 783 PRINTS GTP-binding elongation factor signature 216 225 IPR000795 GO:0003924|GO:0005525
Accr10g00490 783 PRINTS GTP-binding elongation factor signature 180 191 IPR000795 GO:0003924|GO:0005525
Accr10g00490 783 PRINTS GTP-binding elongation factor signature 164 174 IPR000795 GO:0003924|GO:0005525
Accr10g00490 783 PRINTS GTP-binding elongation factor signature 98 111 IPR000795 GO:0003924|GO:0005525
Accr10g00490 783 Pfam Elongation Factor G, domain III 490 563 IPR041095 -
Accr10g00490 783 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 94 369 IPR000795 GO:0003924|GO:0005525
Accr10g00490 783 CDD EF-G 98 368 - -
Accr10g00490 783 Hamap Elongation factor G [fusA]. 92 778 IPR004540 GO:0003746|GO:0005525|GO:0006414
Accr10g00490 783 SMART EFG_IV_2 566 684 IPR005517 GO:0005525
Accr10g00490 783 NCBIfam elongation factor G 88 778 IPR004540 GO:0003746|GO:0005525|GO:0006414
Accr10g00490 783 Pfam Elongation factor Tu domain 2 410 476 IPR004161 GO:0005525
Accr10g00490 783 SUPERFAMILY EF-G C-terminal domain-like 490 567 IPR035647 -
Accr10g00490 783 SUPERFAMILY Ribosomal protein S5 domain 2-like 565 685 IPR020568 -
Accr10g00490 783 Hamap Elongation factor G, chloroplastic. 86 783 IPR030848 GO:0003746|GO:0006414|GO:0009507
Accr10g00490 783 FunFam Elongation factor G 571 701 - -
Accr10g00490 783 Pfam Elongation factor Tu GTP binding domain 95 367 IPR000795 GO:0003924|GO:0005525
Accr10g00490 783 SUPERFAMILY Translation proteins 350 490 IPR009000 -
Accr10g00490 783 FunFam Elongation factor G 494 570 - -
Accr10g00490 783 Gene3D - 690 761 - -
Accr10g00490 783 FunFam Elongation factor G 378 493 - -
Accr10g00490 783 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 92 367 IPR027417 -
Accr10g00490 783 PANTHER TRANSLATION ELONGATION FACTOR G-RELATED 71 779 - -
Accr10g00490 783 CDD EFG_mtEFG_C 689 767 IPR035649 -
Accr10g00490 783 NCBIfam small GTP-binding protein domain 96 266 IPR005225 GO:0005525
Accr10g00490 783 CDD EFG_III 491 566 IPR009022 -
Accr10g00490 783 MobiDBLite consensus disorder prediction 13 27 - -
Accr10g00490 783 CDD EFG_mtEFG1_IV 569 684 IPR005517 GO:0005525
Accr10g00490 783 FunFam Elongation factor G 87 378 - -
Accr10g00490 783 Gene3D - 571 773 IPR014721 -
Accr10g00490 783 Gene3D - 87 378 IPR027417 -
Accr10g00490 783 Gene3D Elongation Factor G (Translational Gtpase), domain 3 494 570 - -
Accr10g00490 783 SUPERFAMILY EF-G C-terminal domain-like 689 778 IPR035647 -
Accr10g00490 783 Gene3D Translation factors 379 493 - -
Accr10g00490 783 SMART EFG_C_a 686 774 IPR000640 -
Accr10g00490 783 FunFam Elongation factor G 690 761 - -
Accr10g00490 783 Pfam Elongation factor G, domain IV 565 683 IPR005517 GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g00490 Accr-Chr10 8364324 8368613 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g00490 95 754 Eukaryotic Initiation Factors Gene Family AT1G56070 25.245 8.03e-43 165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g00490 K02355 - mnt:21401957 1363.98