Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g00481 ATGTCATCCTCTTCTAATACTACAACTGCTGCGTTTACCTATTCTCAGCTGGACCACTTGCCTCCTTCCTCCGACCAGCTTTGTTATGTCCACTGCAACCTTTGTGACACTGTCCTCGCTGTGAGTGTTCCTTGCACGAGCTTGTTCAAGACAGTGACTGTGCGATGCGGCCATTGCACCAACCTTCTTCCTGTGATTGTCAACATGAGAGGCTTGCTTCTTCCATCTCCAAATCATCATCCATTTCACCTCTCTAACTCTTTCTCCTCTCCCCCTCCTCCTCCCCCTCTTAACCTCCTGGATCAGGAGATGCCAAACTCGTCAAATCACTACTTCTCTGCGCCTCCCACTACTCCTAATAGGGTTGCAGCAGCTAACGAGCTTCCACGCCCACCCCTCATCAATAGACCCCCTGGGAAGAGGCAGAGAGTTCCATCTGCTTATAATCGCTTCATCAAGGACGAGATCCAACGCATCAAGTCTGCAAATCCAGATATATCCCACAGGGAAGCCTTTAGCGCAGCTGCCAAGAATTGGGCCCACTTCCCTCACATACACTATGGTCTCATGCCTGATCAGACTGTGAAGAAGACAAATGTGTGCCAGCAGGAAGGAAACGACGACGTTGGCATCATCAAAGATAATAATGGCCTTTTCTCTTCTGCTAATCTTGGTGTTTCTCCTTATTAA 690 0.4884 MSSSSNTTTAAFTYSQLDHLPPSSDQLCYVHCNLCDTVLAVSVPCTSLFKTVTVRCGHCTNLLPVIVNMRGLLLPSPNHHPFHLSNSFSSPPPPPPLNLLDQEMPNSSNHYFSAPPTTPNRVAAANELPRPPLINRPPGKRQRVPSAYNRFIKDEIQRIKSANPDISHREAFSAAAKNWAHFPHIHYGLMPDQTVKKTNVCQQEGNDDVGIIKDNNGLFSSANLGVSPY 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g00481 229 Gene3D High mobility group box domain 134 193 IPR036910 -
Accr10g00481 229 FunFam Axial regulator YABBY 134 205 - -
Accr10g00481 229 CDD HMG-box_SF 143 179 - -
Accr10g00481 229 PANTHER PROTEIN YABBY 6-RELATED 1 199 IPR006780 GO:0007275
Accr10g00481 229 MobiDBLite consensus disorder prediction 115 143 - -
Accr10g00481 229 SUPERFAMILY HMG-box 133 183 IPR036910 -
Accr10g00481 229 Pfam YABBY protein 23 189 IPR006780 GO:0007275
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g00481 Accr-Chr10 8171883 8174336 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g00481 34 227 C2C2-YABBY Transcription Factor Family AT4G00180 56.808 4.75e-57 178
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Accr10g00481 YABBY 5.3e-67 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g00481 K25796 - gmx:100798441 288.885