Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g00477 ATGGATTTGACGTCATCTCATGCATCACCTGTTCTCACTGATCCTGTTCCAATAAGCAAGTCAAGACTAGGAATGCATTCTGGTCTCTTAAGTTACTCCCAGCAAGATTCTTCTTCACCTCTCTCATCATCACTCTCTCCTGTAAAGTATTCAAGAACTAGTTCAAGAAAGACTTCAGGGAATCTTGATGATGTTCGCTCTAATGGTTGGCTTGACGCCATGAAAGCTTCTTCTCCTCCAAGCAAGAAGCATCCCAATAAGGCCTTCAACTCCCACATCGACTCCTCCGAACTAGACTATTCCTCCTGGTTGCTGGAATATCCATCAGCACTAGATTGTTTTGAGGAAATGATTGAGCATGCCAAGAACAAGAAAATTGCAATGTTCCTTGACTACGATGGCACTCTTTCACCCATAGTGAATGATCCAGATCGTGCTTTCATGTCTGAAGCTATGCGAAGTGTAGTGAGGAATGTGGCTAAGTGTTTTCCTACGGCAATCATCAGTGGAAGAAGCCGAGAAAAGGTTTACGATTTAGTTAAACTAACGGAACTGTACTATGCTGGTAGTCATGGGATGGACATTGTTGGGCCTGCTTCTCACACTCTTTCCAATACCCATCCTGACTGTATTAAGTCTACTGACCAACAGGGACAGGAGATAACTCTGTTTCAACCTGCGAGAGATTTCCTGCCTCTGATTGATGAGGTTTATAAGAGGCTGGTGGAGAAAACTAAAGATATACAAGGTGCAAATGTTGAGAACCACAAGTTTTGTGTTTCTGTACATTATCGTAATGTAGAAGAAAACAATTGGACAGTTATTGGACAAATTGTGCATGATACGTTAAAAGATTACCCTCTTCTACGTTCAACACACGGACGCAAGGTCTTAGACATTCGTCCTGTAATAGATTGGAATAAAGGAAAGGCTGTTGAATTTTTACTCGACTGCCTAGGGTTAAGTGAAGGGGATGATGACGTGTTTGCCATATTCATAGGAGATGATAAGACCGATGAAGATGCTTTCAAGGTGCTGAGAGAGAGGAAAGGAGGTTTTGGGATTTTAGTTTCGTCCACCAGAAAACAAAGCAATGCCTCCTATTCTCTCCGGGACACATCTGAGGTAATGAAATTTCTGGAAATGTTGGTGAACTGGAAGAGGGAAGAAGAAAACAAACAGCAACAGAAGAGGCATTCATTTTGA 1206 0.4212 MDLTSSHASPVLTDPVPISKSRLGMHSGLLSYSQQDSSSPLSSSLSPVKYSRTSSRKTSGNLDDVRSNGWLDAMKASSPPSKKHPNKAFNSHIDSSELDYSSWLLEYPSALDCFEEMIEHAKNKKIAMFLDYDGTLSPIVNDPDRAFMSEAMRSVVRNVAKCFPTAIISGRSREKVYDLVKLTELYYAGSHGMDIVGPASHTLSNTHPDCIKSTDQQGQEITLFQPARDFLPLIDEVYKRLVEKTKDIQGANVENHKFCVSVHYRNVEENNWTVIGQIVHDTLKDYPLLRSTHGRKVLDIRPVIDWNKGKAVEFLLDCLGLSEGDDDVFAIFIGDDKTDEDAFKVLRERKGGFGILVSSTRKQSNASYSLRDTSEVMKFLEMLVNWKREEENKQQQKRHSF 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g00477 401 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 48 396 IPR044651 GO:0004805|GO:0005992
Accr10g00477 401 FunFam - 126 178 - -
Accr10g00477 401 CDD HAD_TPP 127 378 - -
Accr10g00477 401 Pfam Trehalose-phosphatase 129 374 IPR003337 GO:0003824|GO:0005992
Accr10g00477 401 NCBIfam HAD-IIB family hydrolase 128 348 IPR006379 -
Accr10g00477 401 MobiDBLite consensus disorder prediction 31 88 - -
Accr10g00477 401 Gene3D - 232 400 IPR023214 -
Accr10g00477 401 Gene3D - 126 215 IPR023214 -
Accr10g00477 401 MobiDBLite consensus disorder prediction 31 65 - -
Accr10g00477 401 FunFam Trehalose 6-phosphate phosphatase 233 393 - -
Accr10g00477 401 NCBIfam trehalose-phosphatase 227 384 IPR003337 GO:0003824|GO:0005992
Accr10g00477 401 SUPERFAMILY HAD-like 127 387 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g00477 Accr-Chr10 8099125 8104681 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g00477 120 383 Trehalose Biosynthesis Gene Families AT1G70290 24.373 1.79e-09 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g00477 K01087 - qsa:O6P43_024315 527.709
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr10g00477 10 8099125 8104681 Accr10g00477 10 8099125 8104681 ECH