Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g00450 ATGGAAGGAAAAGTTTCAGTAAAAGAATTGGTGGAAGCTGAGGAAAAGCCACCCCACACATGTCATAATAATATTACAGATGCGTCACAGAAGAATGATGATATTTTGGGATCCACTATTCTGAGTTTGAGTCTGAATAACCAGCAAGTGCAGGCTCACAGAATTGAAGAGCAGCCGGCAGCCCAATTGGGATTGATGCGGGACAAGCTAGAGGAAATGAAGAGAGAGAATCAGAATCTAAGAGCTATGCTGTCTCAGATCACTCAACATTACGCTGCTCTTCACAATCGCCTTCTCATGGCGATGCAGCAGCGGCCACAACAACAATCGCCTCTCAAGTCTCATAATTTGCAGGAAGACAATGAAGGAGATGAGGGGGAGGAAGCAGCGTTGCCCATCAGGCACTTCTTGGATATCCATGAGCCCTCAGCTTCAGAAAGCAACAAATCAGAAGGACTAATCTCTCACAGAAACAGCATCACGTGCACCAAACCTGCATGTGAAGCTAACAGCAAAAATAATGCGAAAAACATAGAGTCTGATCAGGCAAATCCCTGCAGAAAAGTTAGAGTGTCCATAAAGACACGTTCGGATCTTTCTTTGATTGGTGACGGGTGTCAATGGAGAAAGTATGGACAAAAGATAGCCAAGGGAAACCCATGTCCCAGGGCTTACTATCGCTGCAACATGGGAACTGCGTGTCCAGTTCGCAAGCAGGTGCAACGGTGTGCTAAGGATAAGAGTGTTGTGATTACAAGTTATGAAGGGAAGCATAACCACGCAGTGCCTGCAGCAGCTGCGCCTGTGGCCGCTGCCACGTCAGCAGCGCTGAACATGTTCCTCTCAGGCTCAACCACAAGTGCGCAAGGAAGCACACAATTGAACTCAGGCCTCTTGTCTTGTGCCTTTGCTTCCTTGTCTACAAGCTCATCATGTCCAACCATAACACTGGACTTGACCCAACCCTCCAATCAACACATGCAATTCCAAATGTCTGCCTCATCAAGCCACTCCTCCCACGTCCCACCCATTTCCCTTTGCCCTGGATGGTTATGTGACTCATCCTTGTCTGCCAAGAACATGTCCCTGGTAGATGTCATCAGTGCGGCTTTAGTTAAAGATCCTTCCTTCAAGGCCGCTTTAGCTGCCTCCATTTCTTCATTTTCTGGAGCCACTTCATTACAGCGTTAA 1191 0.4744 MEGKVSVKELVEAEEKPPHTCHNNITDASQKNDDILGSTILSLSLNNQQVQAHRIEEQPAAQLGLMRDKLEEMKRENQNLRAMLSQITQHYAALHNRLLMAMQQRPQQQSPLKSHNLQEDNEGDEGEEAALPIRHFLDIHEPSASESNKSEGLISHRNSITCTKPACEANSKNNAKNIESDQANPCRKVRVSIKTRSDLSLIGDGCQWRKYGQKIAKGNPCPRAYYRCNMGTACPVRKQVQRCAKDKSVVITSYEGKHNHAVPAAAAPVAAATSAALNMFLSGSTTSAQGSTQLNSGLLSCAFASLSTSSSCPTITLDLTQPSNQHMQFQMSASSSHSSHVPPISLCPGWLCDSSLSAKNMSLVDVISAALVKDPSFKAALAASISSFSGATSLQR 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g00450 396 Gene3D WRKY domain 186 264 IPR036576 GO:0003700|GO:0006355|GO:0043565
Accr10g00450 396 MobiDBLite consensus disorder prediction 103 127 - -
Accr10g00450 396 SUPERFAMILY WRKY DNA-binding domain 195 263 IPR036576 GO:0003700|GO:0006355|GO:0043565
Accr10g00450 396 Coils Coil 63 90 - -
Accr10g00450 396 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 56 390 IPR044810 GO:0003700
Accr10g00450 396 SMART WRKY_cls 202 262 IPR003657 GO:0003700|GO:0006355|GO:0043565
Accr10g00450 396 ProSiteProfiles WRKY domain profile. 197 263 IPR003657 GO:0003700|GO:0006355|GO:0043565
Accr10g00450 396 Pfam WRKY DNA -binding domain 204 260 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g00450 Accr-Chr10 7442164 7444391 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g00450 66 321 WRKY Transcription Factor Family AT4G04450 38.158 5.20e-58 193
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Accr10g00450 WRKY 1.2e-21 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g00450 - - pcin:129319814 524.242