Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g00435 ATGGTGAAGATTGCTTTGGGTAGCATCGGTGACTCTTTTAGTGCTGCTTCCATTAAGGCTTATGTAGCAGAGTTCATTGCCACTTTGCTTTTTGTCTTCGCCGGCGTCGGATCGGCCATAGCTTACGGTGCCCTTACAAAGGATGCAGCGTTGGATCCGGCGGGGCTTGTGGCTGTGGCGGTGGCGCATGCATTTGCGTTGTTCGTCGGAGTTTCGGTGGCGGCCAACATCTCCGGTGGCCATTTGAATCCAGCTGTCACATTTGGATTGGTCATTGGAGGCAACATCACCGTCCTAACCGCTATCTTCTACTGGGTTTTCCAATTGTTGGGATCCTTGGTCGCTTGCCTCCTCCTCAAATATGTCACCAGTGCCCCGACCATTCCAGTACATGGACTTGCTTCTGGAGTGGGTATTGGTGAAGGCATTGTTTTTGAAATTGTTGCCACTTTTGGACTCGTTTACACTGTGTACGCCACAGCAGCTGACCCAAAAAATGGCCCATTGGGCACTATTGCACCCATCGCAATTGGTTTCATTGTGGGTGCCAACATCTTGGCCGCCGGCCCATTCAGCGGTGGCTCAATGAACCCGGCCCGTTCGTTCGGCCCAGCTGCTGTATCTGGGGACTTCACCAACTATTGGATCTATTGGGTTGGCCCATTGATCGGTGGCGGTTTGGCCGGCGCCATCTACGACAGCATCTTCATTGGCTCATATGAGGATCGTTATCAAACCCGCGAGTTGGCTTTCCCAGAGTAG 762 0.5262 MVKIALGSIGDSFSAASIKAYVAEFIATLLFVFAGVGSAIAYGALTKDAALDPAGLVAVAVAHAFALFVGVSVAANISGGHLNPAVTFGLVIGGNITVLTAIFYWVFQLLGSLVACLLLKYVTSAPTIPVHGLASGVGIGEGIVFEIVATFGLVYTVYATAADPKNGPLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAAVSGDFTNYWIYWVGPLIGGGLAGAIYDSIFIGSYEDRYQTRELAFPE 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g00435 253 Pfam Major intrinsic protein 14 232 IPR000425 GO:0015267|GO:0016020|GO:0055085
Accr10g00435 253 PRINTS Major intrinsic protein family signature 178 200 IPR000425 GO:0015267|GO:0016020|GO:0055085
Accr10g00435 253 PRINTS Major intrinsic protein family signature 63 87 IPR000425 GO:0015267|GO:0016020|GO:0055085
Accr10g00435 253 PRINTS Major intrinsic protein family signature 145 163 IPR000425 GO:0015267|GO:0016020|GO:0055085
Accr10g00435 253 PRINTS Major intrinsic protein family signature 215 235 IPR000425 GO:0015267|GO:0016020|GO:0055085
Accr10g00435 253 PRINTS Major intrinsic protein family signature 19 38 IPR000425 GO:0015267|GO:0016020|GO:0055085
Accr10g00435 253 PRINTS Major intrinsic protein family signature 100 119 IPR000425 GO:0015267|GO:0016020|GO:0055085
Accr10g00435 253 NCBIfam MIP family channel protein 23 232 IPR000425 GO:0015267|GO:0016020|GO:0055085
Accr10g00435 253 CDD MIP 19 233 IPR000425 GO:0015267|GO:0016020|GO:0055085
Accr10g00435 253 Gene3D Glycerol uptake facilitator protein. 2 246 IPR023271 -
Accr10g00435 253 ProSitePatterns MIP family signature. 81 89 IPR022357 -
Accr10g00435 253 SUPERFAMILY Aquaporin-like 17 244 IPR023271 -
Accr10g00435 253 FunFam Probable aquaporin TIP1-1 2 248 - -
Accr10g00435 253 PANTHER AQUAPORIN-8 4 239 IPR034294 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g00435 Accr-Chr10 7227283 7229236 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g00435 1 249 Major Intrinsic Protein MIP AT5G47450 74.699 2.58e-132 372
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g00435 K09873 - csv:101203925 371.703