Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g00417 ATGGACGAAGTCAACGAAGGACCACCAAATAGAGAACTCTATGCACTCTTGAACTTGTCGCCTGAGGCCTCCGATGAAGAAATCCGAAGAGCTTATCGTCAATGGGCACAAGCCTATCACCCTGATAAATACCAAGCTCCCCATATGAAAGACATTGCTACTGCAAACTTTCAACGTATTTGTGAAGCGTATGAAGTGTTGTCAGATCCAAATAAAAGGCAAATATATGACATATATGGCATGGAAGGTTTGACCTCTGGTCTGGAACTTGGTGCTAAGCTGGATAAAGCAGAAGAGATAAAGGCTGAATTGGATAGGCTACGACGAATGAAGGAGATGCAAAAGATGTCAGCACACTTTAGAACTTCTGGTACAATTCTGGCCAATATGTCTTTGCCACACTGTCGAAATGGTGATGGCCTCATGAGAGGAATGTCTATGGCCAGCGAAGTTCAGTCTCAGTTGTCAAAACGTAATAGTGTTGCAATTGGTGGCAATTTAGCAGTTAATGGCAATGCAGGTGGTGGGGTTGCTACTGCCTTGTTAAGGCATGAAATTTCAAAAGTTTCTTCTATAGAGTTTATGGCTTCAGCTGGGCTGCGAGCTCTGATAGGGGTGCAAACAACACGTCAACTATCAGCACATTCAGATGCCACAGTGGGCCTTGCCATGTCTTTGCAAGATGGTTCGTTGAACCTTTCTAATTCATGGACCCGCCAGCTGTCAGAAACAGCAAGTGGACATATACAACTTGCTTTGGGGCCACAATCATCTATAGCTGTAGGGTGGCGAAAGAAAGATGAGAGGAGATCTGCCTCTGGAGAAGTGAAGTTTGGCACAAGTTCTTTTGATGTAGCAGCTCATTATACCCATCACTTGTCTTCAAAATCTCATGGTCGCATAGCAGGAAGAATTGGGAGTTCAACCCTTGAGATTGAAATTGGGGGTGGGAGGAAGGTATCCAAATTCAGCACCGTCCGCTGGTTGTATACAATTGGAATTCAGGGAATTATTTGGAAATTTGAACTGCATCGTGGTGGCCAAAAGTTAATTATCCCTATTTTGCTGACTAGACATTTGGACCCTGTCTTTGCTAGTGGGGCACTGATTATTCCAGCATCTCTTTACTTCCTTTTGAAGAAATTTTTAATCAAACCCTATTACCTTAAAAGGAATAAGCAGAAGGCTCTAGAGAATGCAAAGAAAACTTCTGCGCAGGTTCAAGAAGCAAGGGCCACAGCAGAAAAAGCTCAGCAATTACAACAAACCGTGGCTAATAGGAAAAGAAATAGGCAATTAGAAGCAGGCGGACTAGTTATTACCAGAGCACTATATGGAAATCACGTTATTTTAAACAAGATGAATTCATCAAGTGCAACAAGTAGTGAATCAGCTTCAGAAGTCATAGATGTTACAATACCACTCAATTTCCTTGTTAGTGATTCTGGCCAACTCAAGCTCCATGAAGGTGTAAAAAAATCAGGCATCATGGGCTTTTGCGATCCTTGTCCTGGAGAACCTAAAAAGTTGTATGTAGAGTACTCTTACGCCGGCAACCAATACAAGGTCCTTGTTGATGATTATGAAGCATTATCGATACCCCGGGGCGTTCCCAGGATTTGA 1623 0.4288 MDEVNEGPPNRELYALLNLSPEASDEEIRRAYRQWAQAYHPDKYQAPHMKDIATANFQRICEAYEVLSDPNKRQIYDIYGMEGLTSGLELGAKLDKAEEIKAELDRLRRMKEMQKMSAHFRTSGTILANMSLPHCRNGDGLMRGMSMASEVQSQLSKRNSVAIGGNLAVNGNAGGGVATALLRHEISKVSSIEFMASAGLRALIGVQTTRQLSAHSDATVGLAMSLQDGSLNLSNSWTRQLSETASGHIQLALGPQSSIAVGWRKKDERRSASGEVKFGTSSFDVAAHYTHHLSSKSHGRIAGRIGSSTLEIEIGGGRKVSKFSTVRWLYTIGIQGIIWKFELHRGGQKLIIPILLTRHLDPVFASGALIIPASLYFLLKKFLIKPYYLKRNKQKALENAKKTSAQVQEARATAEKAQQLQQTVANRKRNRQLEAGGLVITRALYGNHVILNKMNSSSATSSESASEVIDVTIPLNFLVSDSGQLKLHEGVKKSGIMGFCDPCPGEPKKLYVEYSYAGNQYKVLVDDYEALSIPRGVPRI 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g00417 540 SUPERFAMILY Chaperone J-domain 9 83 IPR036869 -
Accr10g00417 540 Pfam DnaJ-like protein C11, C-terminal 386 534 IPR024586 -
Accr10g00417 540 Coils Coil 90 117 - -
Accr10g00417 540 PANTHER CHAPERONE PROTEIN DNAJ 13 1 536 IPR042162 -
Accr10g00417 540 Pfam DnaJ domain 13 77 IPR001623 -
Accr10g00417 540 Coils Coil 390 420 - -
Accr10g00417 540 CDD DnaJ 12 69 IPR001623 -
Accr10g00417 540 ProSiteProfiles dnaJ domain profile. 12 80 IPR001623 -
Accr10g00417 540 ProSitePatterns Nt-dnaJ domain signature. 57 76 IPR018253 -
Accr10g00417 540 PRINTS DnaJ domain signature 14 32 IPR001623 -
Accr10g00417 540 PRINTS DnaJ domain signature 52 72 IPR001623 -
Accr10g00417 540 PRINTS DnaJ domain signature 32 47 IPR001623 -
Accr10g00417 540 PRINTS DnaJ domain signature 72 91 IPR001623 -
Accr10g00417 540 SMART dnaj_3 11 72 IPR001623 -
Accr10g00417 540 Gene3D DnaJ domain 7 102 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g00417 Accr-Chr10 6923191 6933362 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g00417 14 79 C2H2 Transcription Factor Family AT1G74250 47.059 5.49e-09 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g00417 K09531 - gmx:100817782 833.943