Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g00404 ATGGCACCAACTCTCATGGCACCAAAAAGCCAGACTGAGGTACCCATTAAGAAATTCATTAACCGAGGAGCTTGGACTCCCGAGGAAGATAGAAAGCTTGCTCAATGCATTGAACTTCATGGAGCTAAGAGGTGGAAGACTATTGCTCTTAAATCAGGTTTAAACAGATGTGGCAAGAGTTGCAGGCTGAGATGGCTCAACTATCTGAGACCAAACATCAAGAGAGGCAACATTTCACTTGAAGAAGAAGATTTGATTCTTAGGCTTCACAAACTCCTCGGAAATAGGTGGTCCTTGATAGCTGGGAGACTTCCAGGACGAACAGACAATGAAATAAAAAACTATTGGAATTCTCATTTGTGTAAAAAAGTCAACAATCTTGAAGAGAAGAAGAAGAAGAACCCAAGCACTAGTTCAACAACCCCACAAGAAAACACACCCCAAAATACTTGGGATAGTGCCATTGTGGAGAATGAGGAAGCCATTAATGGAAATGGAACAACTTTGAACTCGGAAGTTAGCTTTGATGTGAATGAATTCCTTGACTTCTCTGCCAAAGAAGGATCTTTTCATGAGTTGGATTGGGTAAACAAGTATCTAGAACTAGATGAGTTTCCAGGGAGCAATGGGGTATTTTGA 639 0.4116 MAPTLMAPKSQTEVPIKKFINRGAWTPEEDRKLAQCIELHGAKRWKTIALKSGLNRCGKSCRLRWLNYLRPNIKRGNISLEEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNSHLCKKVNNLEEKKKKNPSTSSTTPQENTPQNTWDSAIVENEEAINGNGTTLNSEVSFDVNEFLDFSAKEGSFHELDWVNKYLELDEFPGSNGVF 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g00404 212 Pfam Myb-like DNA-binding domain 75 120 IPR001005 -
Accr10g00404 212 Pfam Myb-like DNA-binding domain 22 69 IPR001005 -
Accr10g00404 212 CDD SANT 24 69 IPR001005 -
Accr10g00404 212 ProSiteProfiles Myb-like domain profile. 17 69 IPR001005 -
Accr10g00404 212 ProSiteProfiles Myb-like domain profile. 70 120 IPR001005 -
Accr10g00404 212 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 17 157 - -
Accr10g00404 212 SMART sant 74 122 IPR001005 -
Accr10g00404 212 SMART sant 21 71 IPR001005 -
Accr10g00404 212 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 17 73 IPR017930 -
Accr10g00404 212 Gene3D - 22 74 - -
Accr10g00404 212 MobiDBLite consensus disorder prediction 136 150 - -
Accr10g00404 212 Gene3D - 79 151 - -
Accr10g00404 212 SUPERFAMILY Homeodomain-like 21 116 IPR009057 -
Accr10g00404 212 CDD SANT 79 120 IPR001005 -
Accr10g00404 212 MobiDBLite consensus disorder prediction 128 150 - -
Accr10g00404 212 FunFam MYB-related transcription factor 21 74 - -
Accr10g00404 212 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 74 124 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g00404 Accr-Chr10 6724407 6725654 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g00404 17 147 MYB Transcription Factor Family AT5G52600 59.542 4.65e-51 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Accr10g00404 Myb_DNA-binding 3.7e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g00404 K09422 - gmx:100799575 259.996