Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g00403 ATGGAAACAGAAGAAGAAGCACCAGAAGCTCTCCTTCACACTCAACTTCAACTACCCACTACCTCTTCTTCTTCTTCCTCCTCCGGCACCACAGAAGCCATTAATGTACACCATGAAGCTCATAACAAAGAAGAGAGGGTGAAGAGGAAGAAGACGATGGAGAAGAACACAGACATGGTCGACGGGGAGCACCCAACGTACAGAGGCGTACGTATGCGTCAATGGGGGAAATGGGTTTCAGAAATCAGAGAGCCCAGAAAGAAATCCAGAATATGGCTCGGCACTTTTCCCACTGCGGAAATGGCCGCTCGAGCTCACGACGTCGCCGCTCTCACCATTAAAGGCGCCTCTGCTTTCCTGAACTTCCCGGAGCTAGCCACCGTACTTCCTCGTCCGGCCAGTAACTCCCGAAAGGACGTCCAAGCAGCCGCCGCCAAAGCAGCCGCCATCAATTACCACATCAACCGTCAAGGACAACGCGAACCCGAGTCCGAGATCATGCCAGCCGACGCTCCGGCATTGTCAAGTTTTCCGTCAACGGAGGATGATGACCCCTTCTTCAACCTCCCCGATATCTTAAATCACAGCGGCGCCGGCGAGTTTCATTACTCGTCGCTGTGGCTTACAGTGGGCGCCGATTACAGGGACTCTGGTTTTTGGCTCGAAGAGCCCTTTCCGTGGGACTCTTATTAA 693 0.5339 METEEEAPEALLHTQLQLPTTSSSSSSSGTTEAINVHHEAHNKEERVKRKKTMEKNTDMVDGEHPTYRGVRMRQWGKWVSEIREPRKKSRIWLGTFPTAEMAARAHDVAALTIKGASAFLNFPELATVLPRPASNSRKDVQAAAAKAAAINYHINRQGQREPESEIMPADAPALSSFPSTEDDDPFFNLPDILNHSGAGEFHYSSLWLTVGADYRDSGFWLEEPFPWDSY 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g00403 230 MobiDBLite consensus disorder prediction 1 52 - -
Accr10g00403 230 Pfam AP2 domain 65 115 IPR001471 GO:0003700|GO:0006355
Accr10g00403 230 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 40 196 - -
Accr10g00403 230 FunFam Ethylene-responsive transcription factor 2 66 124 - -
Accr10g00403 230 PRINTS Ethylene responsive element binding protein signature 67 78 IPR001471 GO:0003700|GO:0006355
Accr10g00403 230 PRINTS Ethylene responsive element binding protein signature 89 105 IPR001471 GO:0003700|GO:0006355
Accr10g00403 230 SUPERFAMILY DNA-binding domain 66 124 IPR016177 GO:0003677
Accr10g00403 230 Gene3D AP2/ERF domain 66 124 IPR036955 GO:0003700|GO:0006355
Accr10g00403 230 ProSiteProfiles AP2/ERF domain profile. 66 123 IPR001471 GO:0003700|GO:0006355
Accr10g00403 230 MobiDBLite consensus disorder prediction 36 52 - -
Accr10g00403 230 SMART rav1_2 66 129 IPR001471 GO:0003700|GO:0006355
Accr10g00403 230 MobiDBLite consensus disorder prediction 14 35 - -
Accr10g00403 230 CDD AP2 67 125 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g00403 Accr-Chr10 6648416 6649108 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g00403 63 225 AP2-EREBP Transcription Factor Family AT2G44940 47.739 2.86e-51 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Accr10g00403 AP2 1.4e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g00403 - - pcin:129299286 288.115