Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g00402 ATGGAACCAGAAGCTCTCCTTCACACTCAACTTCAACTAACCACTACCTCTTCTTCTTCTTCTTCCTCCTCCGCCGGCACCACAGAAGCCATTAATGTACACCGTGAAGCGCATAACAAAGAAGAGAGGGTGAAGAGGAAGAAGAACACAGACATGGTGGACGGGAAGCACCCAACGTACAGAGGCGTACGTATGCGTCAATGGGGGAAATGGGTTTCAGAAATCAGACAACCCAGAAAGAAATCCAGAATATGGCTTGGCAGTTTTCCCACTGCGGAAATGGCCGCTCGAGCTCACGACTTCGCCGCTCTCGGCATTAAAGGCGTCTCTGCTTTCCTCAACTTCCCGGAGCTAGCCACCGTACTTCCTCGTCCGGCCAGTAACTCCCCAAAGGACGTCCAAGCTGCCGCCGCCAAAGCAGCCGCCATCAATTACCACATCAACCGTCAAGGCAACCCGAACCTGAGTCCGAGATCATGCCAGCCGACTGTCACGGTCTCACCGTGA 507 0.5365 MEPEALLHTQLQLTTTSSSSSSSSAGTTEAINVHREAHNKEERVKRKKNTDMVDGKHPTYRGVRMRQWGKWVSEIRQPRKKSRIWLGSFPTAEMAARAHDFAALGIKGVSAFLNFPELATVLPRPASNSPKDVQAAAAKAAAINYHINRQGNPNLSPRSCQPTVTVSP 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g00402 168 MobiDBLite consensus disorder prediction 148 168 - -
Accr10g00402 168 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 29 150 - -
Accr10g00402 168 SMART rav1_2 59 122 IPR001471 GO:0003700|GO:0006355
Accr10g00402 168 PRINTS Ethylene responsive element binding protein signature 82 98 IPR001471 GO:0003700|GO:0006355
Accr10g00402 168 PRINTS Ethylene responsive element binding protein signature 60 71 IPR001471 GO:0003700|GO:0006355
Accr10g00402 168 SUPERFAMILY DNA-binding domain 59 117 IPR016177 GO:0003677
Accr10g00402 168 Pfam AP2 domain 58 104 IPR001471 GO:0003700|GO:0006355
Accr10g00402 168 CDD AP2 60 118 IPR001471 GO:0003700|GO:0006355
Accr10g00402 168 MobiDBLite consensus disorder prediction 1 58 - -
Accr10g00402 168 MobiDBLite consensus disorder prediction 8 30 - -
Accr10g00402 168 ProSiteProfiles AP2/ERF domain profile. 59 116 IPR001471 GO:0003700|GO:0006355
Accr10g00402 168 MobiDBLite consensus disorder prediction 33 58 - -
Accr10g00402 168 FunFam Ethylene-responsive transcription factor 2 58 117 - -
Accr10g00402 168 Gene3D AP2/ERF domain 59 117 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g00402 Accr-Chr10 6603921 6604427 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g00402 56 146 AP2-EREBP Transcription Factor Family AT2G44940 76.923 4.28e-48 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Accr10g00402 AP2 2.5e-11 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g00402 - - pcin:129299286 197.593