Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g00399 ATGGAAGCAGAACAACAAGAACCAGAAGCTCTGCTTCACACTCAACTTCAACCCACCACTCCCTCTTCTTCTTCTTCCTCCTCCTCCTCCAGCACCGAAGCTCATCACAAAGAAGAGAAGGTGAAGAAGAAGAAGAATATCACCAAGAAGACCAGCTGTAATAAGAACACAGACAAGGTGGACGGGAAGCATCCAACGTACAGAGGTGTACGTATGCGCCAATGGGGGAAATGGGTTTCAGAAATCAGGGAACCCAGAAAGAAATCCAGAATATGGCTCGGAACTTTTCCTTCCGCGGAAATGGCCGCTCGAGCTCACGATGTCGCTGCCCTAAGCATTAAAGGCACCTCCGCTTTCCTCAACTTCCCGGAGCTCGCCACCGTGCTTCCTCGTCCGGCCAGTAACTCCCCAAAGGACGTCCAAGCCGCCGCCGCCAAAGCAGCTGCCATCAATTACCACATCAACCGTCACGGATCCGAACCCGACTCCGAGGTCATGCAGGCCGACGCTCCGGCACTGTCAAGTTCGCCGTCAACAGACGACGATGACACCTTCTTCAACCTCCCTGATATCTTAAATCACGGTGGCACCGACGAGTTTCATTACTCCTCGTTGTGGCTCTTAGCCGGCGCCGATTACAGAGACTCAGGTTTCCGACTTGAAGAGCCATTTCTATGGGACTCATTAGTTTAA 693 0.5238 MEAEQQEPEALLHTQLQPTTPSSSSSSSSSSTEAHHKEEKVKKKKNITKKTSCNKNTDKVDGKHPTYRGVRMRQWGKWVSEIREPRKKSRIWLGTFPSAEMAARAHDVAALSIKGTSAFLNFPELATVLPRPASNSPKDVQAAAAKAAAINYHINRHGSEPDSEVMQADAPALSSSPSTDDDDTFFNLPDILNHGGTDEFHYSSLWLLAGADYRDSGFRLEEPFLWDSLV 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g00399 230 MobiDBLite consensus disorder prediction 51 66 - -
Accr10g00399 230 SUPERFAMILY DNA-binding domain 66 124 IPR016177 GO:0003677
Accr10g00399 230 Pfam AP2 domain 65 115 IPR001471 GO:0003700|GO:0006355
Accr10g00399 230 Gene3D AP2/ERF domain 66 124 IPR036955 GO:0003700|GO:0006355
Accr10g00399 230 FunFam Ethylene-responsive transcription factor 2 65 124 - -
Accr10g00399 230 MobiDBLite consensus disorder prediction 1 66 - -
Accr10g00399 230 PRINTS Ethylene responsive element binding protein signature 67 78 IPR001471 GO:0003700|GO:0006355
Accr10g00399 230 PRINTS Ethylene responsive element binding protein signature 89 105 IPR001471 GO:0003700|GO:0006355
Accr10g00399 230 MobiDBLite consensus disorder prediction 10 31 - -
Accr10g00399 230 ProSiteProfiles AP2/ERF domain profile. 66 123 IPR001471 GO:0003700|GO:0006355
Accr10g00399 230 SMART rav1_2 66 129 IPR001471 GO:0003700|GO:0006355
Accr10g00399 230 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 33 193 - -
Accr10g00399 230 MobiDBLite consensus disorder prediction 158 181 - -
Accr10g00399 230 CDD AP2 67 125 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g00399 Accr-Chr10 6528020 6528712 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g00399 63 225 AP2-EREBP Transcription Factor Family AT2G44940 51.741 7.05e-60 188
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Accr10g00399 AP2 3.6e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g00399 - - pcin:129299286 296.975