Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g00390 ATGGCTGAGGCGACCCCAGCAGCCGCAAATTCCACAACTTTCGAAAAAATGAGCCCCGTAACGGTGCAACAAGCCGTTGATGCTCTACTCAAATGGAAGAATTCGAAGTCTGAGATCGAGAAACCAAAGCTATTTGACTTAGACGATGAATTTGTCTACCTCGTTCTCACCCTCAACAAACTTCCTCCAAAGTCTCGCGTTAATGCCCACAAGATCCCTCTTCCGCATTCTCTTCTCTCCGAATTTTCCGAGCACTGTTTGATCATCGATGACAGGCCCAAGTTGAATCTTACCAAAGAGGACGTGCAGAAGAAGATCAAATCGGAGAATATTCCAGTTTCTAAAGTTATCAAGCTTTCGAAGCTTCAGTCTACTTATCGTCCCTTTGAGGCTAAGCGGAAGCTCTGTGGCTCTCATCACATGTTTTTCGCTGATAAAGGGGTGATTCCTCTGCTGCCACGGCTGTTAGGTAAGCAATTCTTTAAGAAGAAGAAGATTCCTGTGCCAGTGGATTTGAAGCATAAAAATTGGAAGGAGCAGATTGAGAGGGCATGCTCGTCGGCGTTCTTGTTTCTCAGGACAGGTACGTGTAGTGTGGTGAGAGTTGCCAAAGTGTCAATGGAAAGGGTCGAGATTGTCGCTAATGTGGCTGCGGCTATCAATGGTATCGTCGAACTCTTTCCCAAAGGTTGGGGTTCTGTACGGTCTTTTCATTTGAAATTATTGGATTCCCTTGCGTTGCCGCTTTATCAGGTAATTCCTGATATGAAATTGAAGATTGAGGGAGTTAAGAGCATAGAGGAAGTCAAGGAAGAGGATGGAGATATTGTGAAAGATGAGGCTAAGAAGGATCTTAAATTTGTTAAGAAGAAGGGGAGGATCCATGAAGTTCGGTACATGGATGATAATGTGGGCCACGAACACAGTCAAGATGAGTCAGGTGTTGAGGAAGATGTGGATGTAGAAAAAGAAGATGATGATGATGATGATGAAATGGCTGTTGAACCAGTGGTAGATAAGAAGAAGAGGAAAGGATCAAAATCTGACAAAGAGGTTCTTAGTGAGAAAAAATTGAAGAAGGCCACCAAGAACAAGGATGAAAGTAAGAAAGATGGGTTGTCTTCTAATAGAAAGAAGGAAAATGATTTACCTGCTATGGATGAAGTTTCTGGCAAGAAGAAGAACAACAAGGAAAGTGGAGAAGTAAAAGTAAAAGCTAAGAAAATTAGGAAGGCTGCTATGGCTGAGTAA 1251 0.4293 MAEATPAAANSTTFEKMSPVTVQQAVDALLKWKNSKSEIEKPKLFDLDDEFVYLVLTLNKLPPKSRVNAHKIPLPHSLLSEFSEHCLIIDDRPKLNLTKEDVQKKIKSENIPVSKVIKLSKLQSTYRPFEAKRKLCGSHHMFFADKGVIPLLPRLLGKQFFKKKKIPVPVDLKHKNWKEQIERACSSAFLFLRTGTCSVVRVAKVSMERVEIVANVAAAINGIVELFPKGWGSVRSFHLKLLDSLALPLYQVIPDMKLKIEGVKSIEEVKEEDGDIVKDEAKKDLKFVKKKGRIHEVRYMDDNVGHEHSQDESGVEEDVDVEKEDDDDDDEMAVEPVVDKKKRKGSKSDKEVLSEKKLKKATKNKDESKKDGLSSNRKKENDLPAMDEVSGKKKNNKESGEVKVKAKKIRKAAMAE 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g00390 416 MobiDBLite consensus disorder prediction 299 313 - -
Accr10g00390 416 CDD Ribosomal_L1 22 249 IPR028364 -
Accr10g00390 416 MobiDBLite consensus disorder prediction 334 416 - -
Accr10g00390 416 Pfam Ribosomal protein L1p/L10e family 32 244 IPR028364 -
Accr10g00390 416 PANTHER RIBOSOMAL PROTEIN L7AE FAMILY MEMBER 25 244 - -
Accr10g00390 416 MobiDBLite consensus disorder prediction 299 416 - -
Accr10g00390 416 Gene3D - 95 187 IPR016095 -
Accr10g00390 416 MobiDBLite consensus disorder prediction 314 333 - -
Accr10g00390 416 FunFam Ribosomal protein L1p/L10e family 95 186 - -
Accr10g00390 416 SUPERFAMILY Ribosomal protein L1 48 250 IPR023674 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g00390 Accr-Chr10 6213379 6214629 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g00390 138 240 Cytoplasmic Ribosomal Protein Gene Family AT2G27530 32.039 3.15e-10 58.2