Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g00383 ATGGCAAATCCAGTTGAACTTTCAGCCCTCAATCGTATAAAATTGCATCTTCTAGGTGAACTGTCTCCTGTTGGCACTTTCTCCAGTGGCCTTAGCAGTTCAGCGAGCGATGCTAACCAGCAATTCTGGTTTGGTGAATCAAGCGGAGTAATTTCCAGCTCTGATTCTGACTCTCTCTGTACCCAATCATCGAGGTCTGACTCTTCCATAACTGTGTCTGATTACCTCCCTGAACTATTCGAATTCCCATCAAACTCTACTAATCTATCTGAGTTTGAGTCCAAGAACGAAGTAATTGACCTCTTAACGCCCAAAATCGAAGCCGAAACTTCACAATTTGACGCCCATTTTTCCCAATTCGAAGCAAACTCACAGGCAACATCAAGCTCTGGCTCACAGTCCAGCAGTTGCATGTTCGAGTTTCAAAGTATACCCCAGAGCGTCGAGAAGAAATCTCATATCAATCGGAAACCATCGTTGCAAATTACGCTACCCCAAAAAACCGAGTGGATCCAATTTGGAAACCCGGATCTACAACATGAGATTTCAGATATGTTCGTGCAGAATAATTCAAACCTTGAAGAGAAAAAGCACTATAGAGGCGTTCGACAAAGACCGTGGGGCAAATTCGCAGCCGAGATTCGAGATCCAAACAAACGTGGATCTAGGGTTTGGCTCGGAACGTTCGACACGGCGATCGAAGCAGCAAAAGCGTATGATCGAGCTGCGTTTAAGCTTCGAGGCTCCAAAGCTATACTCAATTTCCCTCTGGAAGCAGGGACCTCCGGTTCGACCGACGGCACGGAGGAGAAAAAACGCCGGCGTGTAGATGATGAGGTGGAGGCGGAAATGGATGTGAAACCAGTGGTGAAGAAAGAGAAAACGGAGGAATCTGACGTGGGCAGGATAAGGGATATGCCGTTAACGCCGTCAATGTGGACGGGGTTCTTAGAGAATGATTTGAAGGACATTTTAACAATTCCGCCGTTATCACCGTTATCTCCTCACCCGCCCATGGGTTTTCCTCAGCTAATGGTTGTATGA 1044 0.4665 MANPVELSALNRIKLHLLGELSPVGTFSSGLSSSASDANQQFWFGESSGVISSSDSDSLCTQSSRSDSSITVSDYLPELFEFPSNSTNLSEFESKNEVIDLLTPKIEAETSQFDAHFSQFEANSQATSSSGSQSSSCMFEFQSIPQSVEKKSHINRKPSLQITLPQKTEWIQFGNPDLQHEISDMFVQNNSNLEEKKHYRGVRQRPWGKFAAEIRDPNKRGSRVWLGTFDTAIEAAKAYDRAAFKLRGSKAILNFPLEAGTSGSTDGTEEKKRRRVDDEVEAEMDVKPVVKKEKTEESDVGRIRDMPLTPSMWTGFLENDLKDILTIPPLSPLSPHPPMGFPQLMVV 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g00383 347 SMART rav1_2 198 262 IPR001471 GO:0003700|GO:0006355
Accr10g00383 347 PANTHER DNA-BINDING DOMAIN 134 273 IPR044808 GO:0003700|GO:0009873
Accr10g00383 347 CDD AP2 197 256 IPR001471 GO:0003700|GO:0006355
Accr10g00383 347 FunFam Ethylene-responsive transcription factor 2 197 258 - -
Accr10g00383 347 Pfam AP2 domain 198 248 IPR001471 GO:0003700|GO:0006355
Accr10g00383 347 SUPERFAMILY DNA-binding domain 198 257 IPR016177 GO:0003677
Accr10g00383 347 MobiDBLite consensus disorder prediction 257 278 - -
Accr10g00383 347 PRINTS Ethylene responsive element binding protein signature 238 258 IPR001471 GO:0003700|GO:0006355
Accr10g00383 347 PRINTS Ethylene responsive element binding protein signature 199 210 IPR001471 GO:0003700|GO:0006355
Accr10g00383 347 Gene3D AP2/ERF domain 197 258 IPR036955 GO:0003700|GO:0006355
Accr10g00383 347 ProSiteProfiles AP2/ERF domain profile. 198 256 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g00383 Accr-Chr10 6119118 6120161 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g00383 1 347 AP2-EREBP Transcription Factor Family AT5G47230 45.690 5.59e-70 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Accr10g00383 AP2 4.6e-16 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g00383 K09286 - qsa:O6P43_034054 389.037