Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g00379 ATGTGCCGTCAAAATTCTCCTGTACATCATTCTACCGAGGAAGACACCGCAGCTGATGAGAGCCTTCTAATTTATTGCAAGCCTGTTGAACTGTACAATATTCTCTACCGCCGTTCTCTTCATAATCCTTCATTTCTTAGAAGATGTCTGCGCTACAAATTACGAGCAAGGCATAAAAAGAGGTTAAGAGCTGGAATTGTAATCTTCAATTATAGGGACTGTTACAATACGATTGGAAAGACTGAAGTGACTGAGGACTTTTCTTGTCCATTTTGCTTGATGCAATGTGCAAGCTTTAAGGGTTTGCGATTTCATCTTTGCGCATCACATGATCTCTTCAATTTTGAGTTTTGGGTAACTGAAGACTATCAAGCAGTGAATGTCTCTGTGAAGATTGATATATTGAGATCAGAGAATGTCACTGATGGAATAAATCCACAGTCACAAACCTTCTTCTTCTGTGCAAGGCCTCGAACACGCATATGCAAAGACTTTAATCAAAATGACAAGTGTGCTAATATACAGTTTCTGGAGTTGGATTCGCCCATGCTGGCTACAGAAGGCATGCAGAATGGTTGTCAAGAGAAGTGCAATGGTGGGAACTTGTCCAAGATATCTCCCAGTCAGAAAGAATTGCAGAATGGAAGACAGGATGGAGAAAAATATGGTCCTCATCATCCTGGTGCTCCTGATTACTTGGAACATGTTGCTTCTAGTTTCAACATTCCAGGTGTTCCGATTGCCATGCCCCAAACTTCTAGGGATCCTGAATGTAATAAATCAGTATCTAGATGTGATTCTGCTTTGCCTGCCAAGTCAAGGAAGATGAACATGGATCGATCAGACTCAAGAAATCGTATGCTCCTGCAGAAAAGACAGTTCTTTCACTCTCACAGAGTTCAGCCTATGGCACTGGAGCAAGTGTTATCAGATCGAGACAGCGAAGATGAAGTTGATGACGACATTGCAGATCTTGAAGATCGAAGAATGCTTGATGATTTTGTTGACGTTTCCAAAGATGAAAAGCAGCTCATGCATCTCTGGAATTCTTTTGTGAGGAAGCAAAGTGTGCTGGCAGATGGTCATGTTCCATGGGCCTGTGAGGCCTTTTCCAAGCTTCATGGAAAGGAGTTGATCTCATCTCCCGCATTATTTTGGTGTTGGAGGCTATTCATGATCAAACTCTGGAATCATGGCCTTCTTGATGCTTCCACAATGAACAACTGCAGTATAATTATAGATAGTTTCAAAAACGAGGGTTCTGATGAGAGCAAAAATTGA 1281 0.4161 MCRQNSPVHHSTEEDTAADESLLIYCKPVELYNILYRRSLHNPSFLRRCLRYKLRARHKKRLRAGIVIFNYRDCYNTIGKTEVTEDFSCPFCLMQCASFKGLRFHLCASHDLFNFEFWVTEDYQAVNVSVKIDILRSENVTDGINPQSQTFFFCARPRTRICKDFNQNDKCANIQFLELDSPMLATEGMQNGCQEKCNGGNLSKISPSQKELQNGRQDGEKYGPHHPGAPDYLEHVASSFNIPGVPIAMPQTSRDPECNKSVSRCDSALPAKSRKMNMDRSDSRNRMLLQKRQFFHSHRVQPMALEQVLSDRDSEDEVDDDIADLEDRRMLDDFVDVSKDEKQLMHLWNSFVRKQSVLADGHVPWACEAFSKLHGKELISSPALFWCWRLFMIKLWNHGLLDASTMNNCSIIIDSFKNEGSDESKN 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g00379 426 MobiDBLite consensus disorder prediction 200 227 - -
Accr10g00379 426 CDD ZnB-Zn_EMF2-like 13 134 - -
Accr10g00379 426 PANTHER POLYCOMB GROUP PROTEIN 9 60 - -
Accr10g00379 426 CDD VEFS-box_EMF2-like 289 415 - -
Accr10g00379 426 Pfam VEFS-Box of polycomb protein 276 411 IPR019135 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g00379 Accr-Chr10 5981660 5996312 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g00379 1 68 C2H2 Transcription Factor Family AT5G51230 52.941 4.42e-13 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g00379 - - pcin:129311384 770