Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g00364 ATGGTTAAGCAAGGGCCTTGCTATCACTGTGGAGTTACAAGCACACCACTCTGGCGCAATGGCCCGCCAGAGAAGCCAGTGCTATGCAATGCATGTGGATCTCGATGGAGAACAAAGGGAACCCTGGCAAATTATACCCCTCTACATGCTCGGACTGAAACCGATGATTATGAGGATCCAAGGCTTTCCAGGGCAAAGAACATAACATTAAATAAGAACAAAGAAGTGAAATTGCTCAAAAGAAAGCATAACCATGATAATTTTGTATTCGGTTGGGTTGCCCCTGATTACAACCAAGGATCTCTAAAGGTTATTGATGAAGAGGCCAGCAATAGATCAAGTTCAGGATCAGCTGGCTCTAACTCAGAGAGCTGTGCTCAATTTGCTGGAACAGATGCTAGTGACCTGACAGGTCCTGCTCAGTCAGTGGTAGGGGGTGGTATGGTGCCCTCAAGAAAGAGAACCTGTGTGAACCGTCAAAAGCCATCTTCTGTTGAGAAGCTCACAAAAGATTTATATACTATCCTTCATGAACAGCAGTCCTATTTCTCTGCATCTTCTGAAGAGGATCTAATTTTTGACAGTGAAACACCAATGGTCTCTGTTGAAATAGGACATGGAAGTGTTCTCATTAGGCATCCTAGCTCTATAGCCCGTGAGGAAGAATCTGAGGCTAGCTCCCTTTCAGTTGACAACAAACAATGCCCAACAAGTGAGGCATATTCGTGCTCTGGTGCTGTTGATACGAATAATGATTTCACTGGCATGAACTTTTCATCTCATGGAGTTGAAATTATCAACTACTCTGCTAGCCAAGGAATTCAGCGGGAGAAACTTAAAAGTGTCAGGGAGCCTGAAACTTCACAAATCGTTGGATATCATGATTCACCATTGTGCCTGATAGATTTAGTTGATGTTGTAAACTATGAGGTGTTCTTGACGAAATTGACAAATGAGGAGCAGCAAAAATTACTCAAGTGTCTCCCTGCCGTTGATACCGCTAAACTTCCTGACAGCCTTAAAAGCATGTTCAACAGCTCTCAGTTCAGAAAGAACTTAACTTACTTTCAAGAGCTTCTTGGCGAAGGTGTATTTGATACCTCTTCATCAGGGGCAAACGCTGGAGATTGCCAGGCTTTGAAACGGCTTGCATTATGTGATTTTTCACAGTCAAAATGGGTGGAACAATATAATATACTTAAGAGATGTAAATATGGAGATGAAAAATCTGTTGCTTTTGGATGTACTGGCTCTGCATCCAGTAAAGCTGCAAATGAGAAGAGATCGCATGACGGCTCAAAACAAAGTTTTCCTGAACTGAACTCAACATTTAGGAGCCCCAAAAGGGTGTTGATGATGAAGGCTGGTAGTGAGGGCAAGGAAGTCTTTGAAGATGGCTCTTGCTTCAGTCCAAATGGCTTATTGGCTTTGCCCTCTGATGGCAGCCCACATATGCTGGATGAGAGTTCTGATCAAGATCTCCTGCTCGAAGTGCGATCTAACAGTTCTTTCCCGGAAGCAGAACTGCTGTTTCCAGCCTTAAGATTTGGTACTCAGCTCAGCGCTAGCTGTAGCTATGGCCATTACTGA 1590 0.4365 MVKQGPCYHCGVTSTPLWRNGPPEKPVLCNACGSRWRTKGTLANYTPLHARTETDDYEDPRLSRAKNITLNKNKEVKLLKRKHNHDNFVFGWVAPDYNQGSLKVIDEEASNRSSSGSAGSNSESCAQFAGTDASDLTGPAQSVVGGGMVPSRKRTCVNRQKPSSVEKLTKDLYTILHEQQSYFSASSEEDLIFDSETPMVSVEIGHGSVLIRHPSSIAREEESEASSLSVDNKQCPTSEAYSCSGAVDTNNDFTGMNFSSHGVEIINYSASQGIQREKLKSVREPETSQIVGYHDSPLCLIDLVDVVNYEVFLTKLTNEEQQKLLKCLPAVDTAKLPDSLKSMFNSSQFRKNLTYFQELLGEGVFDTSSSGANAGDCQALKRLALCDFSQSKWVEQYNILKRCKYGDEKSVAFGCTGSASSKAANEKRSHDGSKQSFPELNSTFRSPKRVLMMKAGSEGKEVFEDGSCFSPNGLLALPSDGSPHMLDESSDQDLLLEVRSNSSFPEAELLFPALRFGTQLSASCSYGHY 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g00364 529 SMART GATA_3 1 53 IPR000679 GO:0006355|GO:0043565
Accr10g00364 529 Pfam Asx homology domain 286 368 IPR028020 -
Accr10g00364 529 Gene3D - 3 86 IPR013088 GO:0006355|GO:0008270
Accr10g00364 529 ProSiteProfiles DEUBAD (DEUBiquitinase ADaptor) domain profile. 294 403 IPR044867 -
Accr10g00364 529 ProSitePatterns GATA-type zinc finger domain. 7 32 IPR000679 GO:0006355|GO:0043565
Accr10g00364 529 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 6 45 - -
Accr10g00364 529 CDD ZnF_GATA 6 53 IPR000679 GO:0006355|GO:0043565
Accr10g00364 529 Gene3D - 293 391 IPR038108 -
Accr10g00364 529 MobiDBLite consensus disorder prediction 108 132 - -
Accr10g00364 529 Pfam GATA zinc finger 7 41 IPR000679 GO:0006355|GO:0043565
Accr10g00364 529 ProSiteProfiles GATA-type zinc finger domain profile. 7 40 IPR000679 GO:0006355|GO:0043565
Accr10g00364 529 PANTHER OSJNBB0038F03.10 PROTEIN 7 525 IPR044589 -
Accr10g00364 529 MobiDBLite consensus disorder prediction 422 441 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g00364 Accr-Chr10 5769719 5774784 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g00364 1 510 C2C2-Gata Transcription Factor Family AT4G17570 51.429 6.56e-144 422
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Accr10g00364 ASXH 4.5e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g00364 - - gmx:100803914 673.7