Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g00361 ATGTCCTTGTCGTCTGAGAACTCGGAGGTTTCTGACTTGAAGCCGGTCAAGTCGTTGGAGCAGTCTTCCTTCTCTCAGACTTGTAGCCTCTTGAGTCAGTACCTCAAGGAAAAAGGAAGCTTTGGAGATCTTTGTCTTGGAATGAAATGCAACATCAATCAAACTGGGTCTCCTGAGTCATCTTCTCACTCTGCAACAACGAAGAACCTTCTTCCATCCATGACTCCTGTTAATCCCAGTGTGGGGAATTCTGTTAGCAAGGAGCCTAAATCTGCACAGTTGACACTTTTTTATGGGGGACAAGTTCTTGTGTTTGATGATTTTCCAGCTGAGAAAGCCAAGGAGATCATGTCCCTTGCAGGCAAAGGAATCTCCCCACAAACTCAGAACAGATCTGCTTATACTTTTCCTTCATTTTCTCCTAATTTGGTCACAATTTCTGCTGATTCTAATGCTGCCTGCAATTTGGTGCAAGAACACTCTCAAGCACAACCCAGACCTGTTATTGCTGATCTACCAATTGCTAGGAAAGCTTCACTTCATCGGTTCTTGGAGAAGAGAAAGGATAGAATTGCTGCCAGAGCTCCATATCAAACGAACAATGCCAAGAAGCCAGCTGAAGGCATGCCATGGATGGGCTTATCTCCTAATTCACCACAAGTCTGA 666 0.4459 MSLSSENSEVSDLKPVKSLEQSSFSQTCSLLSQYLKEKGSFGDLCLGMKCNINQTGSPESSSHSATTKNLLPSMTPVNPSVGNSVSKEPKSAQLTLFYGGQVLVFDDFPAEKAKEIMSLAGKGISPQTQNRSAYTFPSFSPNLVTISADSNAACNLVQEHSQAQPRPVIADLPIARKASLHRFLEKRKDRIAARAPYQTNNAKKPAEGMPWMGLSPNSPQV 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g00361 221 MobiDBLite consensus disorder prediction 1 21 - -
Accr10g00361 221 ProSiteProfiles Tify domain profile. 87 122 IPR010399 -
Accr10g00361 221 MobiDBLite consensus disorder prediction 55 86 - -
Accr10g00361 221 MobiDBLite consensus disorder prediction 199 221 - -
Accr10g00361 221 SMART tify_2 87 122 IPR010399 -
Accr10g00361 221 Pfam Jas motif 173 198 IPR018467 -
Accr10g00361 221 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 19 204 IPR040390 -
Accr10g00361 221 Pfam tify domain 88 121 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g00361 Accr-Chr10 5719180 5720678 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g00361 23 215 Tify Gene Family AT1G19180 41.026 4.33e-44 146
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Accr10g00361 tify 1.1e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g00361 K13464 - gmx:100801449 248.825