Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g00360 ATGGCTCGTAGAAGAAATGAACAAGAGCTCACTCTTTCTACTTGTTTGATTCTCGTCTTGGTGTGCTTGGTTTCATGCGGCATGGTCTACGCTTTCGTCTCTTCCGTGCTTGCAATCTCCGACGGCAATTCTTCCGGTTCACGCACTGAGTCCGTAGCATTGGTCGACCAAGACGGTGGTGTTATTGCTAAATCGGATCAGGGTTATGGAGGACGATGCTGTAGAGGAATTGATCATTTGGAGCTCTGGGGTTCCACTGTGAAGTGGGGTTCTGAGTTTAAATTCAACACTTCTGAAGGTTGCTGCAACGCTTGTAAATCCATGTGTACTGGGAATGATGGGCCTTGTTTGTGTGATACATGGGTATTTTGTGGGAATCGTGAGACTTGCGGATCCAAATTTGGTGAGTGTTGGTTGAAGAAACAAAAGGACAGCTTAGCGCCTGAACGGCAAGAAGCAAAGGAAATAGTTGGCTGGACTTCTGGTATCATCTATGGGAAAGGGGAGGGCATTATTCGACTGGAAACTGAATATGGAACTCTGCATATAAAGCTTTTCCCCGATTGTGCCCCTCATTCTGTTGCTTACATTCTGCACCTGTTGGCTTTGGGCCATTGTGCTGGCTGCCACTTTTATCGTGCAGAGAGCCGAGGGGAATCATGGGATTCAACGGGAAACCACATGGAAAATGCTGCTTTTGGACCACCTTATGGATTGGTTCAAGGGGTACTAGAAGCACAAGGGACCACGTTCAAGGAAATTCCTATAGAAGATTGTCCTATACTTAAGAGGGGTTCAGTTGCTTGGGTTGGTTCTGGCCCTGCATTCTTTATTAGCTTAGCTAATCATGTGGAGTGGGGAAATGCGCACACAGTATTTGGATCTGTTTTTCCAGAAGACATGCATATTGTAGAGAGAATTGCCACACTCCCCACCACATCAGATGTTTGGAACAATGTTCATGTTACTGTCTTGGAGAAACCTGTCCCCTTGTTCTTGAGAAGAATCGATAAAAGCCATGGAGAGTTTTAA 1032 0.4583 MARRRNEQELTLSTCLILVLVCLVSCGMVYAFVSSVLAISDGNSSGSRTESVALVDQDGGVIAKSDQGYGGRCCRGIDHLELWGSTVKWGSEFKFNTSEGCCNACKSMCTGNDGPCLCDTWVFCGNRETCGSKFGECWLKKQKDSLAPERQEAKEIVGWTSGIIYGKGEGIIRLETEYGTLHIKLFPDCAPHSVAYILHLLALGHCAGCHFYRAESRGESWDSTGNHMENAAFGPPYGLVQGVLEAQGTTFKEIPIEDCPILKRGSVAWVGSGPAFFISLANHVEWGNAHTVFGSVFPEDMHIVERIATLPTTSDVWNNVHVTVLEKPVPLFLRRIDKSHGEF 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g00360 343 Gene3D - 163 328 IPR029000 -
Accr10g00360 343 SUPERFAMILY Cyclophilin-like 167 324 IPR029000 -
Accr10g00360 343 PANTHER EXPRESSED PROTEIN 1 340 - -
Accr10g00360 343 FunFam Predicted protein 167 330 - -
Accr10g00360 343 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 172 321 IPR002130 GO:0000413|GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g00360 Accr-Chr10 5715945 5718051 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g00360 167 296 U-box Gene Family AT5G67530 29.630 3.03e-06 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g00360 - - pcin:129296375 623.624