Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g00359 ATGGAGGAAAGGTACGAGGCATTGAAGGATCTTGGTTCTGGGAATTTCGGAGTGGCTAGGTTGGTTAGGGATAAGAAGACTAGAGAGCTCGCTGCTGTCAAATACATTGAAAGAGGAAAAAAGATTGATGAGAATGTTCAAAGGGAGATCATCAACCACCGATCTTTAAGGCATCCAAACATTATCAAGTTCAAAGAGGTCGTGCTGACACCAACTCATTTGGCTATTGTCATGGAATATGCTGCCGGTGGTGAACTGTTTGAGAGGATATGCAGTGCCGGTCGATTCAGTGAAGATGAGGCAAGATTTTTCTTCCAGCAACTAATTTCTGGTGTTAGCTACTGTCATTCCATGGAGATTTGTCATAGAGATCTGAAATTGGAGAACACTCTCTTGGATGGAAGTCCGAATCCTCAACTTAAAATATGTGACTTTGGTTACTCAAAGTCTGCTTTACTTCATTCTCAACCGAAATCAACTGTTGGAACTCCGGCTTACATTGCTCCAGAGGTTCTCTCCCGGAAGGAGTATGATGGAAAGATTGCAGATGTGTGGTCCTGTGGTGTGACTCTGTATGTCATGTTAGTTGGAGCATACCCGTTTGAAGATCCTGAAGATCCTAGGAATTTCCGAAAGACAATTGGGAGAATAATGAGCGTGCAGTACAGCATACCCGATTACGTACGTATCTCTTCAGACTGCAGACATCTTCTTTCTCGCATATTTGTTGCCAATCCTGCTAAGAGGATAAGCATACCGGAGATAAAACAACACCCATGGCTTCTGAAGAACTTGGCGAAGGAGACAGCGAAAGGGAAGGAGGAAGCGGAGAAAGAGGAAGGAAGGCAGAATGTGGAAGAGATAATGAATATTATACAAGAGGCAAGAACTACTACAGTGGGGCAAGGATCCAACGGTGGAGGCCAACTTGGTGGCGGAGGGTCATTGGACAGTGGGGATTCTCAGGCAGATGAGGAATATGAAGTTGATGTTAGTGGTGATTATTCTGAGAACTAG 1017 0.4435 MEERYEALKDLGSGNFGVARLVRDKKTRELAAVKYIERGKKIDENVQREIINHRSLRHPNIIKFKEVVLTPTHLAIVMEYAAGGELFERICSAGRFSEDEARFFFQQLISGVSYCHSMEICHRDLKLENTLLDGSPNPQLKICDFGYSKSALLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFRKTIGRIMSVQYSIPDYVRISSDCRHLLSRIFVANPAKRISIPEIKQHPWLLKNLAKETAKGKEEAEKEEGRQNVEEIMNIIQEARTTTVGQGSNGGGQLGGGGSLDSGDSQADEEYEVDVSGDYSEN 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g00359 338 Gene3D Phosphorylase Kinase; domain 1 1 80 - -
Accr10g00359 338 Pfam Protein kinase domain 5 261 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr10g00359 338 MobiDBLite consensus disorder prediction 321 338 - -
Accr10g00359 338 ProSitePatterns Serine/Threonine protein kinases active-site signature. 120 132 IPR008271 GO:0004672|GO:0006468
Accr10g00359 338 Coils Coil 262 282 - -
Accr10g00359 338 SMART serkin_6 5 261 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr10g00359 338 FunFam Serine/threonine-protein kinase SRK2E 1 80 - -
Accr10g00359 338 ProSiteProfiles Protein kinase domain profile. 5 261 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr10g00359 338 FunFam Serine/threonine-protein kinase SRK2E 81 269 - -
Accr10g00359 338 MobiDBLite consensus disorder prediction 296 338 - -
Accr10g00359 338 MobiDBLite consensus disorder prediction 296 311 - -
Accr10g00359 338 SUPERFAMILY Protein kinase-like (PK-like) 3 266 IPR011009 -
Accr10g00359 338 CDD STKc_SnRK2 4 260 - -
Accr10g00359 338 Gene3D Transferase(Phosphotransferase) domain 1 81 269 - -
Accr10g00359 338 PANTHER SERINE/THREONINE KINASE 3 283 - -
Accr10g00359 338 ProSitePatterns Protein kinases ATP-binding region signature. 11 34 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g00359 Accr-Chr10 5707900 5710613 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g00359 4 270 CBL-interacting serine-threonine protein kinases AT5G10930 43.728 3.31e-67 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Accr10g00359 Pkinase 5.9e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g00359 K14498 - qsa:O6P43_024424 546.199