Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g00354 ATGACAAGATCGCTTTGGCTAATAGATCAGCAGCAGAGTTCACCCAGTCTCTTTATCTCTTTCAAATTCAATTTAAGATTTTGTGACTTGAGCTCTATTTTGGAGCCTGGGAGACCTGTGAGGACTGACAAGTCAGCTATACTTGATGATACCATCAGAATCTTGAATCAACTAAAAAATGAAGCTCAGGAACTCAAAGAAACAAACGAGAAGTTGTTGGAGGAAATAAAAACGTTGAAGTTGCTTTCTGTGTTTTCTAGGTTATCAAGAGCTCACCAAGCAAGGTACATGGTTGATTTGGAAGTTTAG 309 0.3851 MTRSLWLIDQQQSSPSLFISFKFNLRFCDLSSILEPGRPVRTDKSAILDDTIRILNQLKNEAQELKETNEKLLEEIKTLKLLSVFSRLSRAHQARYMVDLEV 102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g00354 102 Gene3D - 21 85 IPR036638 GO:0046983
Accr10g00354 102 PANTHER BHLH TRANSCRIPTION FACTOR 22 80 IPR044818 GO:0003700|GO:0006355|GO:0006879|GO:0046983
Accr10g00354 102 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 22 81 IPR036638 GO:0046983
Accr10g00354 102 Coils Coil 48 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g00354 Accr-Chr10 5683190 5684158 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g00354 22 80 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G23210 71.186 1.43e-23 89.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g00354 - - gmx:100787583 80.1073