Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g00341 ATGAGCTGTTTCTTCTTCAAAAAGAAATCTAAAAGCAGGGGAGAGGCAAAATCGGCGCCGGAATTGCAAAATGAGAGGCCGAGGAACAACCCGGCGGTGAACCGGGTGTGCAAGTCGACGAGTTCGATACCGTCGCCGAGGAGCCTGACAGAGGTGTACAAAGAGAAAGCCAAGGAGAGCGATTTCAGAGTTTTTAGTTTGCAAGAGCTTGTACAAGCTACGAATGGCTTCAATAGGATGCTCAAGATCGGTGAAGGTGGCTTTGGGAGCGTGTATAAAGGTACGATTAAGCCTCCCGGTGGACGAGGCGATCCGATCGTTGTAGCCATAAAAAAGCTCAACAAGCATGGCTTTCAGGGTCACAAAGAATGGCTTGCTGAAGTTCAATTTCTTGGCGTTGTAAATCATCCGAATCTGGTAAAACTTCTGGGATACTGCTCAGTTGATGGCGAAAGAGGGACCCAACGTTTGTTGGTGTATGAGTATATGGCAAATAGAAGCCTAGAACCTCATCTTTTTAATCCTTCTCTTCCCACCTTGCCTTGGAAAACAAGATTGCAGATCATGATCGGTGCTGCCGAAGGATTGGCTTATTTACATGAAGGATTGGAATTTCAGGTGATATACCGAGATTTCAAAACTTCAAATGTTCTATTGGATGAGAACTTCCACCCAAAGCTCTCAGACTTTGGTCTTGCGAGGGAAGGCCCCCAAGGCGATAATACTCATGTATCCACTGCGGTGGTTGGAACACAAGGATACGCTGCCCCAGAGTATGTAGACACAGGGCATCTCAAAGCTGAATGTGACATTTACAGTTTTGGAGTGGTACTGTATGAGATCATCACAGGGAGGCGAGCATTAGACAGAAACCGTCCAGCTGCAGAACAAAAACTTCTAAATTGGGTTAAACAGTATCCTGCTGACACTGACAGATTCAGCATGATCATCGACCTGCGTCTCAGAAACCATTTTTCTCCCGGCGCAATTCGCAAAGTTGCTAAGTTGGCCAACACCTGTATAAGTAAGAACCCTAAAGACAGGCCAACCATGGCTCAGATAGTGGAAAGCTTGAAGGAAGCATTGCAGGTTTCAGAGACCTCTAGTACTTCTCAGAGCTCAGCTCCCGAATCTTCTCGATCTGCTTTGGCTCGAAGAGGTAAATAA 1167 0.4636 MSCFFFKKKSKSRGEAKSAPELQNERPRNNPAVNRVCKSTSSIPSPRSLTEVYKEKAKESDFRVFSLQELVQATNGFNRMLKIGEGGFGSVYKGTIKPPGGRGDPIVVAIKKLNKHGFQGHKEWLAEVQFLGVVNHPNLVKLLGYCSVDGERGTQRLLVYEYMANRSLEPHLFNPSLPTLPWKTRLQIMIGAAEGLAYLHEGLEFQVIYRDFKTSNVLLDENFHPKLSDFGLAREGPQGDNTHVSTAVVGTQGYAAPEYVDTGHLKAECDIYSFGVVLYEIITGRRALDRNRPAAEQKLLNWVKQYPADTDRFSMIIDLRLRNHFSPGAIRKVAKLANTCISKNPKDRPTMAQIVESLKEALQVSETSSTSQSSAPESSRSALARRGK 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g00341 388 PANTHER OS01G0588500 PROTEIN-RELATED 35 362 - -
Accr10g00341 388 Gene3D Phosphorylase Kinase; domain 1 48 162 - -
Accr10g00341 388 Gene3D Transferase(Phosphotransferase) domain 1 163 383 - -
Accr10g00341 388 MobiDBLite consensus disorder prediction 8 22 - -
Accr10g00341 388 CDD STKc_IRAK 83 360 - -
Accr10g00341 388 Pfam Protein kinase domain 79 356 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr10g00341 388 MobiDBLite consensus disorder prediction 363 380 - -
Accr10g00341 388 SUPERFAMILY Protein kinase-like (PK-like) 55 358 IPR011009 -
Accr10g00341 388 ProSitePatterns Protein kinases ATP-binding region signature. 83 112 IPR017441 GO:0005524
Accr10g00341 388 MobiDBLite consensus disorder prediction 1 44 - -
Accr10g00341 388 ProSitePatterns Serine/Threonine protein kinases active-site signature. 207 219 IPR008271 GO:0004672|GO:0006468
Accr10g00341 388 MobiDBLite consensus disorder prediction 363 388 - -
Accr10g00341 388 MobiDBLite consensus disorder prediction 23 44 - -
Accr10g00341 388 ProSiteProfiles Protein kinase domain profile. 77 362 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr10g00341 388 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 163 373 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g00341 Accr-Chr10 5568758 5570946 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g00341 1 358 Glycoside Hydrolase AT3G07070 41.530 5.61e-92 281
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Accr10g00341 Pkinase 2.5e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g00341 - - adu:107483795 564.688