Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g00323 ATGGCTCGGATTAGTGATGCTGCTGCCACCTTGTCCAGTTATGGCGTTGTTGATATTAAATACAGAAGAGTTTCATGTAACTACTCACACGAAAATATCACTATTAAGATACATAAGGGCAGCAGCAACCCTAATTACTTGGCCTTCGTCATAGAGAACCAACAAGGCAAGAGAGATATCACTGCTGTGCAGATCTGTGAGACGCAGAACTTTGTGTGCAAGTTGCTGAGTAGGAGTTTTGGAACTGTATGGACAGCGAACTCTCCTCCAAGTGGACCATTATCAGTGAGGATGCTGTTTAGTGATGAACATGGAAAAGACGAGTGGGTTGTTCCTGTGAATAACATTCCTCAAGATTGGAAAGCTGGAGCAAGCTATGATTCTGGAGTTCAAGTGAATCAATAG 405 0.4296 MARISDAAATLSSYGVVDIKYRRVSCNYSHENITIKIHKGSSNPNYLAFVIENQQGKRDITAVQICETQNFVCKLLSRSFGTVWTANSPPSGPLSVRMLFSDEHGKDEWVVPVNNIPQDWKAGASYDSGVQVNQ 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g00323 134 Gene3D - 25 129 IPR036749 -
Accr10g00323 134 PANTHER EXPANSIN-B3 1 131 - -
Accr10g00323 134 PRINTS Expansin/Lol pI family signature 14 30 IPR007118 GO:0005576
Accr10g00323 134 PRINTS Expansin/Lol pI family signature 73 87 IPR007118 GO:0005576
Accr10g00323 134 PRINTS Expansin/Lol pI family signature 114 128 IPR007118 GO:0005576
Accr10g00323 134 Pfam Expansin C-terminal domain 33 114 IPR007117 -
Accr10g00323 134 SUPERFAMILY PHL pollen allergen 32 128 IPR036749 -
Accr10g00323 134 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 45 128 IPR007117 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g00323 Accr-Chr10 5370621 5371872 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g00323 11 132 Expansin Gene Family AT4G17030 38.525 7.12e-25 93.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g00323 - - rcu:8263701 204.142