Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g00322 ATGTCTCTCTCTGTTGCTTTGTTTTCTCTCCTTCTCACCACCACCTTGCTAATTTTCATGCAAAATCTGGCAATTGATGCTGCGTGTTCCGATTGTTTTGTACCTTCTCGAGCATCCCAATACAAAAACTCCAAGGAACATGGAACAGATGTAGGTGCATGTGGGTTTGGTTCCTTTGGTGCTACCGTCAATGGCGGGAACGTCTCAGCTGCTTCTAATCTTTATCGTGATGGTCTCGGCTGTGGTGCCTGTTACCAGGTGATTTGTACGCGCGAACAGTGCTTATTGCTCAGACGAAGGAGTGACGATAGTGATAACGGACCAGGGTTCAGGTCATGA 339 0.472 MSLSVALFSLLLTTTLLIFMQNLAIDAACSDCFVPSRASQYKNSKEHGTDVGACGFGSFGATVNGGNVSAASNLYRDGLGCGACYQVICTREQCLLLRRRSDDSDNGPGFRS 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g00322 112 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 51 94 IPR007112 -
Accr10g00322 112 Gene3D - 20 104 IPR036908 -
Accr10g00322 112 SUPERFAMILY Barwin-like endoglucanases 23 93 IPR036908 -
Accr10g00322 112 PANTHER EXPANSIN-B3 12 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g00322 Accr-Chr10 5369786 5370583 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g00322 16 89 Expansin Gene Family AT4G17030 44.156 3.72e-12 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g00322 - - gmx:100794009 125.561