Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g00315 ATGGTTTGCACTGCTAACGATATACATGAGTGGAAAGATTTTCCAAAGGGACTTAGGGTTCTTCTCCTTGATGGAGACAGCAATTCTGCTTCGGAGCTAAGAACAAAGCTTGAGGCTATGGACTATATCGTTTCTACATTCTGTGATGAGAATGAAGCCTTGTCAGCAATCTCCAGTAAACCTGAAGGCTTCCATGTTGCCATAGTAGAGGTTAGTACCAGCAGCCTGGGAAGTTTCAAAATTCTTGAGTATGCTAAAGACTTGCCTATCATCATGGCTTCAAACACTCACTGCTTAAGCACCATGATGAAGTGTGTAGCGCTTGGTGCTGTTGAGTTCCTAAGAAAGCCACTCTCTGAGGAAAAACTCAGGAATATCTGGCAACATGTTGTCCACAAGGCATTCAACACTGGGACAAGTGTTCTTCCTAAATCACTAGAACCTGTCAAAGAATCTTTGGTATTGCAGCTTCAAACTGATGGTGGAGAGCATGAAACTGTAAACTTGGAGGAATCTAGGTTCAGTGATGATGACCATGAGCAGTCTGCAGGAAGTGACAAGTACCCAGCTCCTTCGACTCCACAATTAAAACATGGGGCAAGGTTAATGGATCATGGAGATTGCCAAGAACAAACTAATTGTTCAACAGAAAAGGAAAGTGAGGACCATAATGGGGAATCTAAATTTGTTGAAACTACATTTGGGGTTTTGAATTCTGAAGGTACTTGTAAACCAGTAGAACCTAAAAAGGCTCTGAACATGGAGGATGAGAACCTTGCAAATGATTCCAAGAGTGAGAAACTCGTTTCTCAACCTGTACATGATAGTGTTCTCAGCAACACTGAAGGTGATACTGTATCTCCAAATAAAGCACGTGTTCATGGTGATTCCCGTCAAATCAAAACCAAGAAGAAGGTAGACTGGACCCCTCAGCTGCACAAGAAGTTTGTGAAGGCAGTGGAACAATTAGGGGTTGATCAAGCAATTCCTTCTCGGATACTGGAATTAATGAATGTGGAGGGCTTGACAAGGCATAATGTGGCAAGTCATCTTCAGAAATATAGAATGCATAGGAGGCAAATCTTGCCGAAGGAAGATCGAAGATGGGTACAAAGACCAGTTATGTCTTTCCCTCCATATTATTCTAACGGCACCCCATCACCAGCTCCTGTGTATCCTATCTGGGGACAATCTGGCAATCAACCAGCCGGTATGCATGCTTGGGGTCTGCCTGGTTATCCACTGTGGCATCGTACTGAAAATTGGCACTGGAAGCCATATCATTGGATACATGCAGAGTCATGGGCTTGCCCAGTGTTGCCAGCTTCTCAAAGTCCTTGTAATTCGTACTCTCAAAATATACGTGGATGGCACAATGCTAATTCTGTTAATTATAGTGCAAGCAAGTTACAGAATTCCTGTGAATATCATCCAGCAGAAGATGTTGTTGACAAGGCAGTGAAGGAGGCAATAAGCAAGCCAGGGCTACCAATGCCTTTAGGCCTCAAACCTCCTTCCATTGATTGTGTGTTGTCTGAGCTCTCTAGGCAAGGCTTTTCCACCATCCCTCCTTGCTCTCGCCATGCTAAACCAGAACCGAAACTGGACTCCGAACCCCAGTGA 1623 0.4399 MVCTANDIHEWKDFPKGLRVLLLDGDSNSASELRTKLEAMDYIVSTFCDENEALSAISSKPEGFHVAIVEVSTSSLGSFKILEYAKDLPIIMASNTHCLSTMMKCVALGAVEFLRKPLSEEKLRNIWQHVVHKAFNTGTSVLPKSLEPVKESLVLQLQTDGGEHETVNLEESRFSDDDHEQSAGSDKYPAPSTPQLKHGARLMDHGDCQEQTNCSTEKESEDHNGESKFVETTFGVLNSEGTCKPVEPKKALNMEDENLANDSKSEKLVSQPVHDSVLSNTEGDTVSPNKARVHGDSRQIKTKKKVDWTPQLHKKFVKAVEQLGVDQAIPSRILELMNVEGLTRHNVASHLQKYRMHRRQILPKEDRRWVQRPVMSFPPYYSNGTPSPAPVYPIWGQSGNQPAGMHAWGLPGYPLWHRTENWHWKPYHWIHAESWACPVLPASQSPCNSYSQNIRGWHNANSVNYSASKLQNSCEYHPAEDVVDKAVKEAISKPGLPMPLGLKPPSIDCVLSELSRQGFSTIPPCSRHAKPEPKLDSEPQ 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g00315 540 PANTHER TRANSCRIPTION ACTIVATOR GLK1 1 525 IPR044825 GO:0003700|GO:0045893
Accr10g00315 540 MobiDBLite consensus disorder prediction 164 184 - -
Accr10g00315 540 NCBIfam myb-like DNA-binding domain, SHAQKYF class 303 357 IPR006447 GO:0003677
Accr10g00315 540 Pfam Myb-like DNA-binding domain 306 355 IPR001005 -
Accr10g00315 540 Gene3D - 300 361 - -
Accr10g00315 540 MobiDBLite consensus disorder prediction 264 287 - -
Accr10g00315 540 MobiDBLite consensus disorder prediction 519 540 - -
Accr10g00315 540 MobiDBLite consensus disorder prediction 260 298 - -
Accr10g00315 540 FunFam Two-component response regulator-like APRR2 17 142 - -
Accr10g00315 540 FunFam Two-component response regulator 299 362 - -
Accr10g00315 540 MobiDBLite consensus disorder prediction 159 199 - -
Accr10g00315 540 SUPERFAMILY CheY-like 16 133 IPR011006 -
Accr10g00315 540 Gene3D - 18 139 - -
Accr10g00315 540 ProSiteProfiles Response regulatory domain profile. 19 131 IPR001789 GO:0000160
Accr10g00315 540 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 300 359 IPR017930 -
Accr10g00315 540 SMART REC_2 18 127 IPR001789 GO:0000160
Accr10g00315 540 CDD REC_typeB_ARR-like 20 131 - -
Accr10g00315 540 MobiDBLite consensus disorder prediction 207 226 - -
Accr10g00315 540 SUPERFAMILY Homeodomain-like 301 359 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g00315 Accr-Chr10 5238822 5243186 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g00315 1 526 Response Regulator Gene Family AT4G18020 47.803 1.85e-135 402
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-ARR-B Accr10g00315 Myb_DNA-binding 4.7e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g00315 - - gmx:100784905 698.738
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr9g00531 9 6044815 6049258 Accr10g00315 10 5238822 5243186 CCT