Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g00308 ATGAGAACAGAAATCATATCAAGAAAATGCATAAAGCCAACCTCACCCACACCACCACACCTTAAATCCTTTAAACTCTCCCTTCTAGACCAGCTCTCCCCTAACATCCATGGCAACATGACCCTCTTTTACTCTTCCAACGCCGCCAATAACGGTGAAGGCGACAGTGGCATCCTCTCCGGCTTCTCCGCCAAATCACAACTTCTCCAAACCGCCCTCGCCCAAACCCTCAGCCGCTTCTACCCTCTCACCGGCCGCATCCGCGACACCGCCACCATCGACTGCAACGATGACGGTGTCGTCTACGTTGAAGCTCGAACGGACAATTATCTTTCCGACATCCTCAGCCACCCAGACTTTGATACTCTCGAACACTTCCTACCCTCCACCGACAAGGAAACCATGGAATTGTCCAATGGTTCTATGCTTATCGTACGGTTCACATTGTTCGGTTGCGGTGGGACTGCCCTGAGCATATCCCTCACCCACAAGATCGCCGATATAGCAGCGTTGATCACAATCCTTCAGAGCTGGACCGCCACGTGTCGTGCACTTGCTGAACCGGACGTTCCTCACTTGGGCCTCGGCGCTTCTCTCTTTCCTCCGCGACAAATTCCGGGGATGTCCGCATCCATAAATATTGCCGCCGAGAAGTTTACCGCAAGACGGTTCGTATTCACCGGTGCCAAGGTGAGAGAGCTTAAAAGCAGAGTTTTAGCCGCACTCACCGACGTGGATATTCAGTTCCACCCGTCTCGTGTGGAAGTGGTGCTAGCTCTTATATGGAGATGCGCGATGCTGGCTTCCAGCTCCAAAACGGCGTCGTTTAAGCGGTCGGCTCTGTTCCAAGCCGTGAACCTGCGTCCCCGGATGGAGCCGCCGGTGCCAGGGACGGCCATCGGGAACTTCGTGTGGCCGTTTGCGGTGACGGTGGAGGAAGAGAAGGAGATGGAATTGCATGAGTTAGTGAAGAAGATGAGAAAAGGAATGAAGGAGTTCATAGAGAAGAAGGCAAGAAAGTTCAATGAAGGAGGTGGGTTTGAAACTGTGATGGAGCTTATGAAGGAGAGGGGAGAGATGTTGAAGAAAAAGAAAGAGACAGTGGTTTATAAGTGTACGAGTTGGTGTAGGTTTCCATTGTACGAGGTGGATTATGGGTGGGGGAATCCTGTGTGGATGTCGAGTGTGAATAAGATTGTGAGTAATACAGTTGCTTTGATGGATGTAAAAGATGGTGGAGTTGAAGCTTTGATGACTTTGAATGAGCAAGAAATGGATATCTTTGAACAACATCAAGAATTGCTTCAATATGCTCTGCTCAATCCTAGTATTCTTATCTGA 1341 0.5011 MRTEIISRKCIKPTSPTPPHLKSFKLSLLDQLSPNIHGNMTLFYSSNAANNGEGDSGILSGFSAKSQLLQTALAQTLSRFYPLTGRIRDTATIDCNDDGVVYVEARTDNYLSDILSHPDFDTLEHFLPSTDKETMELSNGSMLIVRFTLFGCGGTALSISLTHKIADIAALITILQSWTATCRALAEPDVPHLGLGASLFPPRQIPGMSASINIAAEKFTARRFVFTGAKVRELKSRVLAALTDVDIQFHPSRVEVVLALIWRCAMLASSSKTASFKRSALFQAVNLRPRMEPPVPGTAIGNFVWPFAVTVEEEKEMELHELVKKMRKGMKEFIEKKARKFNEGGGFETVMELMKERGEMLKKKKETVVYKCTSWCRFPLYEVDYGWGNPVWMSSVNKIVSNTVALMDVKDGGVEALMTLNEQEMDIFEQHQELLQYALLNPSILI 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g00308 446 Gene3D - 1 207 IPR023213 -
Accr10g00308 446 PANTHER F21J9.9 4 438 - -
Accr10g00308 446 Pfam Transferase family 3 434 - -
Accr10g00308 446 Gene3D - 216 438 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g00308 Accr-Chr10 5124998 5126338 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g00308 1 430 Monolignol Biosynthesis Gene Families AT5G48930 21.983 2.57e-26 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g00308 - - pcin:129311859 736.487