Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g00290 ATGGGTACAGAGATTGGCCTTCTCTCCTCCATGACCCAGATCCAAAAATTGTCAAATCCCGACACAACACCCAATAATCACAATAATCACCTTCTTCTTCTTCTTCAATCTCACCCTCTCTCAAACCCTAGCTCTTCTTCTTCTTCAACCTCCTTCAGGATCATGTGGAACCCTAGGGATCCCCAGGAAGAAGATGACTCTTGGGAGGTTAGAGCTTTTGCTCAGGACACCACTAACATCATGGGCACCACTTGGCCTCCCAGGTCCTACACCTGCACTTTTTGTCGTAGGGAGTTCCGTTCAGCCCAAGCTCTCGGTGGCCACATGAATGTTCACCGCCGTGACCGTGCCCGTCTCCACCATCACCACCACCACCAGCTACCACCACCTTCTGCTGCCGCTGCTGCTACTGCTACTGCTGCTTCCGTTCACAACAACCTAATCTCGCCTCACCATCATCACCAAGAGCTTGTTGTTGCTAATAACAACAACGGCAGATTCTTTCTCTACCATCTGCCAAACCCTGATGAGATTGGACACTTCTCTGGTACTAATAATTATAGTTCTCATAATCTTGCTTCTTCTTCTTCTTTGAATGCATGTGGAGATTCATCAGTATCTGTATTACCCACCACGGTTCTCTCTATTTTGCCCTACCCACCAAGCAATAATAACTTAGTGTCAATTACTGGCACCACCCCCTCCTATGATTTTCAACTGGAGCGGCGGCCTCAAGGATTCGTTAATTCTTCTTCGTCTTATTGTGATTCTAGCAACAAAGTGGAACAGCCCACAACCTCGTCCTTCGCCGGCAACGGTGGCCACGAGGAGCTTGATCTAGAGCTCCGGCTGGGGCACAGACCGCCTGAACCATGA 876 0.4909 MGTEIGLLSSMTQIQKLSNPDTTPNNHNNHLLLLLQSHPLSNPSSSSSSTSFRIMWNPRDPQEEDDSWEVRAFAQDTTNIMGTTWPPRSYTCTFCRREFRSAQALGGHMNVHRRDRARLHHHHHHQLPPPSAAAAATATAASVHNNLISPHHHHQELVVANNNNGRFFLYHLPNPDEIGHFSGTNNYSSHNLASSSSLNACGDSSVSVLPTTVLSILPYPPSNNNLVSITGTTPSYDFQLERRPQGFVNSSSSYCDSSNKVEQPTTSSFAGNGGHEELDLELRLGHRPPEP 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g00290 291 MobiDBLite consensus disorder prediction 249 272 - -
Accr10g00290 291 Pfam C2H2-type zinc finger 90 114 - -
Accr10g00290 291 ProSitePatterns Zinc finger C2H2 type domain signature. 92 112 IPR013087 -
Accr10g00290 291 MobiDBLite consensus disorder prediction 276 291 - -
Accr10g00290 291 ProSiteProfiles Zinc finger C2H2 type domain profile. 90 117 IPR013087 -
Accr10g00290 291 SUPERFAMILY beta-beta-alpha zinc fingers 87 117 IPR036236 -
Accr10g00290 291 SMART c2h2final6 90 112 IPR013087 -
Accr10g00290 291 MobiDBLite consensus disorder prediction 249 291 - -
Accr10g00290 291 Gene3D Classic Zinc Finger 77 142 - -
Accr10g00290 291 PANTHER OS07G0101800 PROTEIN 62 288 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g00290 Accr-Chr10 4913192 4914067 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g00290 55 183 C2H2 Transcription Factor Family AT4G17810 51.471 5.68e-34 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g00290 - - zju:107430492 173.326