Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g00284 ATGGAATCGATGGAGGAAATATCATGGGAAAGCTTGATGCAGGATTTGGAAATGGCTGGTGATGATTTCAGTTTTGCTTTTGAGGCTCATGATCAATTATTTAGCAGTCCATCACAAGAAAACTTTGAAAGTTGTTGGAATAATGATAATAATATTAATGCAGATACTACCTGGAACGCTGCAAATGGCATCATCCTCACAAGCAATAATCCCTCAACTTCAGAATCTGTAGTCAACACCCAACATCACATGGTGGCAAATTCTCATGATTATTCTGGCTTCATGGTACAAGACAAGCCTTATTCCTTTGATGATCCTTCAAAGAGGTACTTGCGTCAAACAAATATTAAAGAAACAGACAGGAGGCCAGAGGGTAGAAATTCACGAGTACAAGATCACTTACTTGCTGAGAGAAACAGGAGAGGAAAGATCTCCCAACACTTCATTGCCCTCTCAGCCCTAATTCCTGGCCTCAAAAGGACGGACAAGGCATCTTTGTTGGAGGGAGCTATAAGGCACGTGAAGCAGCTTCAAGAACAAGTGAAAGCACTGGAACAACAGCCCAAGAAGAAGAAGAAAACTGCTGAATCTGTGGTGTTTGTGAAGAAGTCTCAGCTGACTTCTACTACGGACACGACGTCGTTAAATAATAATTCATCAGATATTGAAAACTTGGATGATGTCTCAAAATGGAATAGCAGAGTAGCAAAAGCAGATGTTGAAGCAAGGGTTTCAGAAAAGAAGGTGTTGATTAGAGTGCAATGTGAGAAAAAAGAAGGAATAATGGTGAAGACAATGAAGGAGATTCAAAAACTCCACTTGTCTGTGATAAATAGTAGCGTGATGCCATTTGGGAGATCCATTCTAGACATCACTATCATAGCTGAGATGGAAGATGAGTTCAACTTGAGCAGCCAAGAGCTCGCTAGAAATATCAGGGTGGCACTCTTACAATCAATATAA 963 0.405 MESMEEISWESLMQDLEMAGDDFSFAFEAHDQLFSSPSQENFESCWNNDNNINADTTWNAANGIILTSNNPSTSESVVNTQHHMVANSHDYSGFMVQDKPYSFDDPSKRYLRQTNIKETDRRPEGRNSRVQDHLLAERNRRGKISQHFIALSALIPGLKRTDKASLLEGAIRHVKQLQEQVKALEQQPKKKKKTAESVVFVKKSQLTSTTDTTSLNNNSSDIENLDDVSKWNSRVAKADVEARVSEKKVLIRVQCEKKEGIMVKTMKEIQKLHLSVINSSVMPFGRSILDITIIAEMEDEFNLSSQELARNIRVALLQSI 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g00284 320 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 129 190 IPR036638 GO:0046983
Accr10g00284 320 Coils Coil 167 194 - -
Accr10g00284 320 Pfam Helix-loop-helix DNA-binding domain 131 178 IPR011598 GO:0046983
Accr10g00284 320 MobiDBLite consensus disorder prediction 105 130 - -
Accr10g00284 320 Gene3D - 125 202 IPR036638 GO:0046983
Accr10g00284 320 PANTHER BHLH TRANSCRIPTION FACTOR 14 318 - -
Accr10g00284 320 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 128 177 IPR011598 GO:0046983
Accr10g00284 320 SMART finulus 134 183 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g00284 Accr-Chr10 4831218 4833031 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g00284 130 316 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G22770 44.503 5.76e-47 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Accr10g00284 HLH 1.8e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g00284 - - pcin:129310385 341.273