Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g00276 ATGCATGATCGGCGCCTCCCTCTGGGGGTGGGGGTTTCCTCTTTCCTCCCAAATAAACTTATCTCTCAGTCTTCGCACTTGCAGCTCCCACAAATGGAAGTTCTCGCTCTCAGACATTTCCCCTTTTTACTGTACTCTGTACTGTTCTTCTGTCATTTCTCACCCCATGCTTCTTCACTGGCTGACTCTCAGATTCTTCTGCGGGTTAAGACTACTCAGATCGTTGATGAGAATGGCAGCCTCAAAAACTGGGACAGAGGGCTCATTCCCTGCAACTGGATTGGCATTACCTGTGATCAATTCAATCGCTCCGTTGTCGCCATTGACCTCTCTGGTACTGGCATTTCTGGTGTATTTCCGTTTGGTTTTTGTCGCATTAGGACCCTGCGTAGGCTCTCTGTTGCTGAAAATTATCTCGGCGGTGTTGTCCCTCCTCAGTCACTCCTTCTTTGTTCCCACCTTCGTGTCCTGAACCTCTCTGATAACTTATTTGTCGGTGAGTTGCCGCAATTCTCGTCGGAGCTTTCTGAACTGAGATGGCTTGATTTCTCTCGGAACAACTTCACTGGCGATATTCCGGCAAGTTTTGGCCGGTTTCCACATCTCAGGGTGCTCAGCTTGTCCTCGAACTTGCTCAACGGAACCATTCCCGCGTTCTTGGGCAATCTCAGTGAGTTAACTCGATTGGAACTCGCTTATAATCCGTTCACTCCAGGACCATTACCTTCCCAACTTGGAAATTTATCGAAACTCGAAGTTATGTTCCTGGCCGGTTCAAACGTCGAAGGGAGCATACCGGACTCAATGGGGAAGCTGATCTCGCTCAAGAACTTGGATTTGTCGCTAAATTTGTTGTCAGGTAAAATTCCAGATAGCTTTTCGGGTTTGAAAAGTGTAGAACAAATTGTGCTATTTCTAAACCAACTTTCAGGTGAAATTCCTCAAGGTTTGGGAAACCTTAGCAGTTTGATTAGTTTAGACCTCTCCCAAAATAGTCTCACAGGGAAATTGCCGGATTCAGTCGCTGCCTTGCGGCTCAATTTTCTGTCATTGAACGACAATTTCCTCGAAGGAGAAATCCCTGGGAATGTAGCTACAAATCCAAATTTATGGATATTAAAACTCTTTAATAACAGCTTCACTGGGAAACTACCCAAAGATCTCGGTCGAAACTCCGATTTACAGGAGCTTGATGTTTCTACCAATGACTTAGTTGGTGAGTTGCCTAGGTACCTCTGTGAAAGGAACAAGTTGCAGCGTCTTATCACATTTAAGAATCGTTTTTCCGGAACCTTCCCTGAGCAATATGGTGACTGTCATTCACTCTTCTACGTCAGAATTGAGTACAACCAGCTCTCCAGTGAGGTGCCTCCAGCATTCTGGAAACTTCCTGGCCTTGAAATTTTAATAATGAATAACAACTTGTTGGCAGGTTCAGTCTCCATCTCCGGCGCTCGGAGACTCTCCGTACTTCAAATATCCGGTAACAGGTTTTCTGGACACTTTTCTGCGGAAATTTGTGAACTCCACAATATAAGAGAGATCGACATTAGCCGGAACCAGTTTACCGGTGAAGTTCCGTCATGTATAACTGGATTAAAGAAGTTACAGAAGCTGAGCATGCAAGAGAACATGTTCACCAGCGCGATTCCTCGTAATGTGAATTCCTGGGCTGAATTGACCCTATTGAACTTGTCATATAACCGATTGTCCGGTATGATTCCGCCAGAACTTGGTAATTTGCTACATTTGAGTTCTCTTGATCTTGCCATGAATTTCTTGACCGGAGGAATTCCGCCGGATTTAGCTAAGCTCAAGCTCAGCCAGTTCAACGTGTCGGGAAACAAATTGTCTGGAAACGTACCTTCAGGGTTCAACAATGAATTCTATTTGGCGGGTCTGATCGGTAATCCGAACCTCTGCAGCGAAGTCCTGAAATCCCTCCACCATTGTTCCGAATCCAAGCACTTCTCGTCGGTACCAATTATTGTGTTATCTACCTTCATCGTACTCCTTCTGGGGTTTCTCCTCTTGTTCCTCAAGAGCAAGAAGTCATTCTTTTTAACTGGCAAATCCAAGCGCTCTTTTAGGACAACAAGATTCCATATGGTGGGGTTTAAGGAAGAAGATGTTATTCCATTGCTAACCAGTGAGAATCTCATTGGCACAGGGAGCTCAGGACAGGTCTATAGGGTGATGCTCAAGACAGGACAGACAGTTGCCGTGAAGAAGCTGTGGGAAGGACGTTCAGGAAAACTGAATACAGATTCTGTTTTCAAATCGGAAGTTGAGACACTGGGTAGAATTCGACATGTTGATATAGTAAAATTGCTATATAGCTGCTGTGCTGACGATATGCAGATTCTGGTGTACGAGTATTTAGAGAACGGCAGCTTGAGTGACGTTTTGCACGGTGAAAAGTTCAGAGAGTTGATAGATTGGTCAAGGCGGTTCAACATAGCAGTAGGTGCAGCTCGGGGACTGGCTTATTTACACCACGACTGTGTCCCACCTATAGTTCATAGAGACGTCAAGAGTAGTAACATCCTGCTGGATCACGATTTCAGACCTCATGTTGCAGACTTTGGATTGGCTAAGACCTTGCAGTCAAAGGCAAACGAAGATGGTGGCAGTGCTACATCCAAGGTCGCTGGGTCCTATGGTTACATTGCTCCAGAATATGCTTACACACTTAAAGTAACTGAGAAAAGTGATGTGTATAGCTATGGTGTACTACTGATGGAATTGATCACAGGCAAGAGGCCCAATGACCCATCCTTCGGTGAGAACAGGGGTATAGTGAAGTGGCTCACTGAGACTGCTTTATCAAGTTCTATAAGAGAGAGTGACAATATGGAAAGTCATAGCCACGACCTCGTTCAGATTGTAGACCCAAGATTGAACCCCTCCACGTGTGATTATGAAGAGATTGGGAGGGTTTTCAATGTGGCTCTGCTTTGCACCTCAGCATTCCCCATGAATAGACCTTCAATGAGAAGAGTAGTCGACTTGCTCAGGGAACATAAGAGTCGTCCCAAGTCATGA 3045 0.4532 MHDRRLPLGVGVSSFLPNKLISQSSHLQLPQMEVLALRHFPFLLYSVLFFCHFSPHASSLADSQILLRVKTTQIVDENGSLKNWDRGLIPCNWIGITCDQFNRSVVAIDLSGTGISGVFPFGFCRIRTLRRLSVAENYLGGVVPPQSLLLCSHLRVLNLSDNLFVGELPQFSSELSELRWLDFSRNNFTGDIPASFGRFPHLRVLSLSSNLLNGTIPAFLGNLSELTRLELAYNPFTPGPLPSQLGNLSKLEVMFLAGSNVEGSIPDSMGKLISLKNLDLSLNLLSGKIPDSFSGLKSVEQIVLFLNQLSGEIPQGLGNLSSLISLDLSQNSLTGKLPDSVAALRLNFLSLNDNFLEGEIPGNVATNPNLWILKLFNNSFTGKLPKDLGRNSDLQELDVSTNDLVGELPRYLCERNKLQRLITFKNRFSGTFPEQYGDCHSLFYVRIEYNQLSSEVPPAFWKLPGLEILIMNNNLLAGSVSISGARRLSVLQISGNRFSGHFSAEICELHNIREIDISRNQFTGEVPSCITGLKKLQKLSMQENMFTSAIPRNVNSWAELTLLNLSYNRLSGMIPPELGNLLHLSSLDLAMNFLTGGIPPDLAKLKLSQFNVSGNKLSGNVPSGFNNEFYLAGLIGNPNLCSEVLKSLHHCSESKHFSSVPIIVLSTFIVLLLGFLLLFLKSKKSFFLTGKSKRSFRTTRFHMVGFKEEDVIPLLTSENLIGTGSSGQVYRVMLKTGQTVAVKKLWEGRSGKLNTDSVFKSEVETLGRIRHVDIVKLLYSCCADDMQILVYEYLENGSLSDVLHGEKFRELIDWSRRFNIAVGAARGLAYLHHDCVPPIVHRDVKSSNILLDHDFRPHVADFGLAKTLQSKANEDGGSATSKVAGSYGYIAPEYAYTLKVTEKSDVYSYGVLLMELITGKRPNDPSFGENRGIVKWLTETALSSSIRESDNMESHSHDLVQIVDPRLNPSTCDYEEIGRVFNVALLCTSAFPMNRPSMRRVVDLLREHKSRPKS 1014
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g00276 1014 FunFam Leucine-rich repeat receptor-like protein kinase TDR 341 653 - -
Accr10g00276 1014 ProSiteProfiles Protein kinase domain profile. 715 1011 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr10g00276 1014 ProSitePatterns Protein kinases ATP-binding region signature. 721 744 IPR017441 GO:0005524
Accr10g00276 1014 Pfam Leucine rich repeat N-terminal domain 61 99 IPR013210 -
Accr10g00276 1014 Pfam Leucine rich repeat 250 309 IPR001611 GO:0005515
Accr10g00276 1014 Pfam Leucine rich repeat 177 235 IPR001611 GO:0005515
Accr10g00276 1014 Gene3D Ribonuclease Inhibitor 326 653 IPR032675 -
Accr10g00276 1014 FunFam Leucine-rich repeat receptor-like protein kinase 60 217 - -
Accr10g00276 1014 SUPERFAMILY L domain-like 346 622 - -
Accr10g00276 1014 Gene3D Transferase(Phosphotransferase) domain 1 794 1014 - -
Accr10g00276 1014 ProSitePatterns Serine/Threonine protein kinases active-site signature. 839 851 IPR008271 GO:0004672|GO:0006468
Accr10g00276 1014 SUPERFAMILY RNI-like 103 416 - -
Accr10g00276 1014 SUPERFAMILY Protein kinase-like (PK-like) 715 1005 IPR011009 -
Accr10g00276 1014 Gene3D Ribonuclease Inhibitor 216 316 IPR032675 -
Accr10g00276 1014 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 417 1006 - -
Accr10g00276 1014 Gene3D Phosphorylase Kinase; domain 1 714 793 - -
Accr10g00276 1014 SMART serkin_6 715 986 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr10g00276 1014 Gene3D Ribonuclease Inhibitor 60 215 IPR032675 -
Accr10g00276 1014 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 218 313 - -
Accr10g00276 1014 FunFam Leucine-rich repeat receptor-like protein kinase 794 1014 - -
Accr10g00276 1014 Pfam Protein kinase domain 717 930 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr10g00276 1014 Pfam Leucine Rich Repeat 322 342 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g00276 Accr-Chr10 4595396 4598531 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g00276 56 1010 Receptor kinase-like Gene Family AT5G65710 54.918 0.0 1002
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Accr10g00276 Pkinase 6.7e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g00276 - - gmx:100813889 1211.82