Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g00254 ATGATGTCCACTCTTCCCCCTTCTGACCCTTTCCTCAATAACCCCTTATGGGCCTTGGACTGGGAAGGCCCGGGCTTTGGCCCTGACCCCGGCCTGTTCCCGGACCTTCCATCCTCCCCCGTCAAGCCTGCCGGTAAGTCCCAAAGCCATGCCTGCTCTGATGCCACCGACGTGAAACACATGACGTCATCCATTTTGGACGAGCGGAGACGGAGGAGAATGTTATCGAACCGGGAGTCGGCGAGGCGGTCCCGCATGCGTAAGCAGAAGCATCTAGAAAACTTAAGGTTTCAGGTGAACCGGTTTAAGATCCAGAACCGAGAACTCAGCAACAGGTTACAGTTCCTTCTGCATCACTATAACCGTGTGAGCACGGAGAATCAATGGCTCCGGTCCGAGCAAATCCAGCTCCGGCAAAAACTTCACAATATAACTCAATTTTTCGCTCTCCAGCCCTTCTCATCCTCGTCTGCATGGCCATGCAATACTACCACCATTTTCACGACAGATTAA 513 0.5302 MMSTLPPSDPFLNNPLWALDWEGPGFGPDPGLFPDLPSSPVKPAGKSQSHACSDATDVKHMTSSILDERRRRRMLSNRESARRSRMRKQKHLENLRFQVNRFKIQNRELSNRLQFLLHHYNRVSTENQWLRSEQIQLRQKLHNITQFFALQPFSSSSAWPCNTTTIFTTD 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g00254 170 Pfam bZIP transcription factor 69 122 IPR004827 GO:0003700|GO:0006355
Accr10g00254 170 SUPERFAMILY Leucine zipper domain 69 120 IPR046347 GO:0003700|GO:0006355
Accr10g00254 170 Gene3D - 67 121 - -
Accr10g00254 170 MobiDBLite consensus disorder prediction 29 59 - -
Accr10g00254 170 MobiDBLite consensus disorder prediction 42 59 - -
Accr10g00254 170 Coils Coil 92 112 - -
Accr10g00254 170 SMART brlzneu 65 129 IPR004827 GO:0003700|GO:0006355
Accr10g00254 170 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 72 87 IPR004827 GO:0003700|GO:0006355
Accr10g00254 170 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 67 130 IPR004827 GO:0003700|GO:0006355
Accr10g00254 170 CDD bZIP_plant_GBF1 74 121 IPR045314 GO:0003700|GO:0006355
Accr10g00254 170 FunFam BZIP transcription factor 67 119 - -
Accr10g00254 170 PANTHER BZIP TRANSCRIPTION FACTOR 44 42 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g00254 Accr-Chr10 4300064 4300576 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g00254 59 141 bZIP Transcription Factor Family AT4G37730 55.422 3.79e-23 91.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Accr10g00254 bZIP_1 1.1e-08 CL0018