Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g00250 ATGACTAATGCTAGAGGAACTTTGGGTTACATAGCTCCAGAGGTCTTTTCTCGAAATTTTGGAAATGTGTCTCACAAAGCAGATGTTTATAGTTTTGGGATGTTGCTACTTGAATTAACAGGGGGAAGAAGAATTACGCATGATAGAAAAGAAAATGCTCCCCACATTCACTATCCTGAATGGATCTATAATATTTTAGAAGAAAGGGAAGATGTTAGGATTCATATTGCAGAAGAAGGTGATGCTAAAATTGCACAAATGTTGGGAATAGTGGGACTATGGTGCATTCAGTGGCATCCTGTGGATCGACCATCAATGCAAGCAGTGATTAAAATGTTGGAAGGAGAAGGAGACAAATTACTAATACCTCCAAATCCTTTTAATTCTGAAGGCATGTCAACAAGAAAAAGGGCCAGCGCGCCTACAAGAAGCCTAATGCAAGGTTTAGAAATAATCCAAGAAGTAGAGTGA 471 0.3885 MTNARGTLGYIAPEVFSRNFGNVSHKADVYSFGMLLLELTGGRRITHDRKENAPHIHYPEWIYNILEEREDVRIHIAEEGDAKIAQMLGIVGLWCIQWHPVDRPSMQAVIKMLEGEGDKLLIPPNPFNSEGMSTRKRASAPTRSLMQGLEIIQEVE 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g00250 156 ProSiteProfiles Protein kinase domain profile. 1 121 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr10g00250 156 Gene3D Transferase(Phosphotransferase) domain 1 1 120 - -
Accr10g00250 156 PANTHER RUST RESISTANCE KINASE LR10-RELATED 1 133 IPR045874 GO:0004672
Accr10g00250 156 SUPERFAMILY Protein kinase-like (PK-like) 2 114 IPR011009 -
Accr10g00250 156 Pfam Protein kinase domain 2 111 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g00250 Accr-Chr10 4234951 4235421 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g00250 1 127 Receptor kinase-like Gene Family AT5G38280 50.000 5.25e-38 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Accr10g00250 Pkinase 2e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g00250 - - lja:Lj0g3v0257909.1 216.853