Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g00247 ATGGAAACTTCACCTGTAAACTCCTTCTTCTCTGTATGCTTGTTTCTAATTCTTTGGTTTTCAGAGTCTGTAGGAAGCTGGAATAGCTGTCCAGAACTCGAAACAACCTGTGGAAACCTGACTGTCCGATTTCCTTTCCGAATAATAGGACGTCAACCAGAACAATGTGGCTATCCTGGTTTTGATTTACAATGTTCTTCTGCCAATCATTCTGTTCTTGAGCTTCCTGGATCACTCAAGCTCAATATCAAACTTATTGATTACAAATCCCAAACCATTCACTTATATGATCCTTCTGGCTGCCTTTTAAGGCATATCCGTAACCTCACCCTTCCTTCCCCTTTTCAACTCATATCCCCGTATATCTATGACTACACCTTTTTCAATTGCTCATCACCTAGAGATGGAGGATTATATTCAACGTGTCTGAGCAGCTCTACCTATCGAGTATATGCCGTTTATTCTAACGATGATATCGGAGAATTATTTCCCTTGTTATTTTGCAGCAAAATATTCAACATTTCATCCATCCCATATGAGATCATTAAACTTGATGACACTCTTGATTTGATGTGGTCTCATCCAATGTGTGAACATTGTGAATCAAAAGGAGCAAGATGTGGATTCAAGAATAGTAGTACCAGTTATGATACTGCATGTTTCAAGGTTCGCCACAAAGGCTCATCAAACAAATTTGTAATTACAGGATCAATACTGCTTCTAGTGGTGATGCTGGTTGTAATTCATTATGTTCGCAGCACATACAAATCTAGAAAAGAAAGCCAAGCAATAATTGAAAAGTTCCTGAAAGATTATAGAGCTTTCAAGCCCACCAGATATTCTTATGCTGAAATCAAGAGGATTACCAATCAATTTGAGGTTAAGTTGGGAGAAGGATCGTTTGGTACTGTATTTAAAGGAGACATTTCATCTGAGTTCAAAGTTGCAGTGAAAATGCTCACTAATTCTGAAGGAAACGGCACAGAGTTCGTCACTGAAGTTGGAACAATGGGCAAAATCCATCACGTCAACATTATTCGCTTAATGGGCTTCTGTGCTGATGGCTTTAGAAGAGCGCTGGTTTATGAATATTTTCCAAATGGTTCATTACAAAATTTTATAAATTCGCCAAATAATAGGCAAAACTTCATTGGTTGGAAAAAGCTCCATGAAATTGCTCTAGGCGTAGCCAAAGGAATTGAGTACCTTCATCAAGGCTGTGAGCAACGAATACTTCATTTCGACATCAAACCTCATAATGTTTTATTGGATAATGACTTCACTCCAAAAATATGTGATTTTGGTTTGGCAAAATTGTGTTCCAAAGATCAAAGCATGGTGTCAATGACTAACGCTAGAGGAACTTTGGGTTACATAGCTCCAGAGGTCTTCTCTCGAAATTTTGGAAATGTGTCTCATAAAGCAGATGTTTATAGCTTCGGGATGTTGTTACTTGAATTAACAGGGGGAAGAAAAATTACACATGACACAAAAGAAAATGCTCACCACATTCACTATCCTGAATGGATCTATAATATTTTAGAAGAAAGGGATGATGTTAGGATTCATATTGAGGAAGAAAGCGATGCTAAAATTGCAAAAAGGTTGGGAATAGTGGGACTATGGTGCATTCAGTGGCATCCCGTGGATCGACCATCAATGCAAGCGGTGGTTAAAACGTTAGAAGGAGAAGGAGACAAATTACCAATACCTCCAAATCCTTTTAATTCTGAAGGCACCTCAACAAGAAAAAGGGCCAGTGCGCCTATAAGAAGCCTGATGCAAGGATTAGAAATAATCCAAGAAGTAGAGTGA 1815 0.3846 METSPVNSFFSVCLFLILWFSESVGSWNSCPELETTCGNLTVRFPFRIIGRQPEQCGYPGFDLQCSSANHSVLELPGSLKLNIKLIDYKSQTIHLYDPSGCLLRHIRNLTLPSPFQLISPYIYDYTFFNCSSPRDGGLYSTCLSSSTYRVYAVYSNDDIGELFPLLFCSKIFNISSIPYEIIKLDDTLDLMWSHPMCEHCESKGARCGFKNSSTSYDTACFKVRHKGSSNKFVITGSILLLVVMLVVIHYVRSTYKSRKESQAIIEKFLKDYRAFKPTRYSYAEIKRITNQFEVKLGEGSFGTVFKGDISSEFKVAVKMLTNSEGNGTEFVTEVGTMGKIHHVNIIRLMGFCADGFRRALVYEYFPNGSLQNFINSPNNRQNFIGWKKLHEIALGVAKGIEYLHQGCEQRILHFDIKPHNVLLDNDFTPKICDFGLAKLCSKDQSMVSMTNARGTLGYIAPEVFSRNFGNVSHKADVYSFGMLLLELTGGRKITHDTKENAHHIHYPEWIYNILEERDDVRIHIEEESDAKIAKRLGIVGLWCIQWHPVDRPSMQAVVKTLEGEGDKLPIPPNPFNSEGTSTRKRASAPIRSLMQGLEIIQEVE 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g00247 604 SUPERFAMILY Protein kinase-like (PK-like) 273 562 IPR011009 -
Accr10g00247 604 FunFam PR5-like receptor kinase 365 572 - -
Accr10g00247 604 Gene3D Phosphorylase Kinase; domain 1 265 364 - -
Accr10g00247 604 SMART serkin_6 290 547 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr10g00247 604 FunFam serine/threonine-protein kinase PBS1-like 257 364 - -
Accr10g00247 604 Pfam Wall-associated receptor kinase galacturonan-binding 30 97 IPR025287 GO:0030247
Accr10g00247 604 MobiDBLite consensus disorder prediction 567 587 - -
Accr10g00247 604 Pfam Protein kinase domain 293 559 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr10g00247 604 ProSitePatterns Serine/Threonine protein kinases active-site signature. 411 423 IPR008271 GO:0004672|GO:0006468
Accr10g00247 604 Gene3D Transferase(Phosphotransferase) domain 1 365 567 - -
Accr10g00247 604 PANTHER RUST RESISTANCE KINASE LR10-RELATED 261 580 IPR045874 GO:0004672
Accr10g00247 604 ProSiteProfiles Protein kinase domain profile. 290 576 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr10g00247 604 ProSitePatterns Protein kinases ATP-binding region signature. 296 318 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g00247 Accr-Chr10 4171241 4173402 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g00247 197 574 Receptor kinase-like Gene Family AT1G66910 43.424 1.17e-106 334
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Accr10g00247 Pkinase 1.1e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g00247 - - qsa:O6P43_019907 708.753