Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g00246 ATGAGAAGGGACATGTGTTGCTCTTCAGGAAAATTACTGGTGGACCTGTGTCTGATACTGTCATTCTGCAGAACTTGCAAGGCATCAGATGGAGGCGAGAAGTGTTCTAGTTGGTGCGGAGATGTTAATGTTAGCAGCCCTTTCCGGCTAATGGACTCTCCGGAGGGTTGTGGTGACTACAGGTATGAGCTATCTTGCGAGCAGAACCAAACGTTGCTGTATTTGAAAGCTGGGAGATATGATGTTTTGTGCATCAATTATGAGAACTATACGATCCGAGTGAGGGATAGTGATGTGCTAGAGTCCGGTCACAGAAAAATTTCCTTGCCTGCCTATTTTTCAACAGAGCTGGACTTGAGCTATTCAAACTTGGATAATCCATTTACCACCACCATTCTTACACACTTTGGAAGTGGTCTTTTTGGATTTGAACTGAAACAATTGGCAAAGAATATGATATTCGTAAGGTGCAGGAACCCAGTGCATTCCCCTCGGTTTGTGGACACAGCCCCTTGCTTCAACACTTCAAATGCCTCTGTAGCTTCTTCTTCTTCGTATTTGTATATGAATGTTGGCAGCGAAACTCTGAGGGATTTGGAGTTAGACGACGGTTGTGGTGTAGAGCTGATGTATATGACGTCGTGGCCTGCTTGGAAGAACAACCAGTTTGATTGGTCATGCACAGACATCCACAATATGCTTCTTTATGGCTTTGAACTTTCTTGGTTGCGAGCATTGTGCAATAGCGTATATGGAGATTTCGCATATCTTAATCAAACCAAACATCCAGACTGTCTTGTTTATGACATTATGAACAAGAAATTACCAGATGACCTCGCACAGATTTTATCGGTGGCCCGTGTGGTGATCTTTAGCACAGCTTTTGCAATTCCCATCTTAATGTTATTAGTTTGTCATTGTGCTTGTAAATGTGTTGTGGGGCCTCCATTTATCATTGGCCTGTTGATCTATAAATGGAGACGAAGACATCTATCAATGTATGAGAACATTGAAGATTTTCTGCAAAGCGAGAACAACAGCATAATGCCTATAAGGTATTCTTGTAGAGAAATCATAAAGATGACTCAAGGGTTCAAAACAGAAATCGGAAAAGGAGGCTATGGCTCTGTGTTTAAAGGACAACTTCGAAGTGGTCATGATGTGGCTGTCAAGATGTTGGATATGGTCAAAGGTAATGGACAAGATTTCATAAGTGAAGTTGCTACACTTGGTAGAATCCATCATGTTAATGTGGTCCAACTCATCGGTTATTGTGTAGAAGGACCAAAGCATGCTCTTGTGTACGAGTTCATGGAGAATGGGTCTCTTGACAAATACATTTTCTCTAAACCTAATGGTATTGAGCAATCCTTGAGTCTCCATCAATTGTATGCCATTTCTCTCGGAGTAGCTCGTGGTATTAACTATTTACATAAAGGATGCAACATGCAAATTTTGCATTTTGATATAAAACCACACAACATTCTTCTTGATGATAACTTCATCCCGAAGGTTTCTGATTTTGGCCTTGCTAAACTTTATCCTACAAATAATAGGACTGTGTCTCTAACAGCAGTAAGGGGAACTATAGGATACATTGCTCCTGAATTGTTCTACAGAAATATGGGAGGAATTTCTTACAAAGCTGATGTCTATAGCTTTGGGATGCTATTAATGGAAATAGATGGTAGAAGGAAGAATTTGAATGAGTCGGCTGAACACTCAAGTCAATTTTACTTTCCGTTTTGGGTATATGATCAACTAAACGAAGGAAATGAAATCAACATAGAAGATGCAACAGAGGAAGAGATGAAAGTGGCAAGGAAAATGATGATCATTGGGTTGTGGTGCATTCAAACCAGGCCTAGCGATCGTCCATCAATGAACAAAGTCGTGGAGATGCTTGAGGGAGATGAGCAAGACTTAGAATTGCCTCGTCAAAAACCTTCTTTTTATTCACAAGATTTGCCTGAAGCTGATGATAATAATCATTCAAGTTCAATGGTCACATCATCTGAGCTTAGGGAATGTTCTTCAATGGATGAAATTGTAGAGATGACAAAGATAAAGGAGGAAGCCTCAAAATTGTCTCAAGAGTCTAGTCCATATGCACTAAATTTACCAACAAAATCATTCAAGTTCAATGAGTAA 2151 0.4017 MRRDMCCSSGKLLVDLCLILSFCRTCKASDGGEKCSSWCGDVNVSSPFRLMDSPEGCGDYRYELSCEQNQTLLYLKAGRYDVLCINYENYTIRVRDSDVLESGHRKISLPAYFSTELDLSYSNLDNPFTTTILTHFGSGLFGFELKQLAKNMIFVRCRNPVHSPRFVDTAPCFNTSNASVASSSSYLYMNVGSETLRDLELDDGCGVELMYMTSWPAWKNNQFDWSCTDIHNMLLYGFELSWLRALCNSVYGDFAYLNQTKHPDCLVYDIMNKKLPDDLAQILSVARVVIFSTAFAIPILMLLVCHCACKCVVGPPFIIGLLIYKWRRRHLSMYENIEDFLQSENNSIMPIRYSCREIIKMTQGFKTEIGKGGYGSVFKGQLRSGHDVAVKMLDMVKGNGQDFISEVATLGRIHHVNVVQLIGYCVEGPKHALVYEFMENGSLDKYIFSKPNGIEQSLSLHQLYAISLGVARGINYLHKGCNMQILHFDIKPHNILLDDNFIPKVSDFGLAKLYPTNNRTVSLTAVRGTIGYIAPELFYRNMGGISYKADVYSFGMLLMEIDGRRKNLNESAEHSSQFYFPFWVYDQLNEGNEINIEDATEEEMKVARKMMIIGLWCIQTRPSDRPSMNKVVEMLEGDEQDLELPRQKPSFYSQDLPEADDNNHSSSMVTSSELRECSSMDEIVEMTKIKEEASKLSQESSPYALNLPTKSFKFNE 716
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g00246 716 Gene3D Phosphorylase Kinase; domain 1 337 437 - -
Accr10g00246 716 PANTHER RUST RESISTANCE KINASE LR10-RELATED 334 658 IPR045874 GO:0004672
Accr10g00246 716 FunFam PR5-like receptor kinase 438 647 - -
Accr10g00246 716 Pfam Protein tyrosine and serine/threonine kinase 366 635 IPR001245 GO:0004672|GO:0006468
Accr10g00246 716 MobiDBLite consensus disorder prediction 656 677 - -
Accr10g00246 716 Pfam Wall-associated receptor kinase galacturonan-binding 35 96 IPR025287 GO:0030247
Accr10g00246 716 SUPERFAMILY Protein kinase-like (PK-like) 343 637 IPR011009 -
Accr10g00246 716 ProSitePatterns Protein kinases ATP-binding region signature. 369 391 IPR017441 GO:0005524
Accr10g00246 716 FunFam serine/threonine-protein kinase PBS1-like 332 437 - -
Accr10g00246 716 ProSitePatterns Serine/Threonine protein kinases active-site signature. 485 497 IPR008271 GO:0004672|GO:0006468
Accr10g00246 716 ProSiteProfiles Protein kinase domain profile. 363 651 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr10g00246 716 SMART serkin_6 365 635 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr10g00246 716 MobiDBLite consensus disorder prediction 651 677 - -
Accr10g00246 716 Gene3D Transferase(Phosphotransferase) domain 1 438 653 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g00246 Accr-Chr10 4160593 4163965 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g00246 47 659 Receptor kinase-like Gene Family AT1G66910 34.169 5.34e-100 320
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Accr10g00246 PK_Tyr_Ser-Thr 1.9e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g00246 - - pcin:129310315 834.713