Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g00235 ATGTCTGTGTCCCCAAACCACCACCTGGTAACTCTTGACTTGTTCTGCAATGAAGCAGCTAGCGAGGTGGTTTCATCGGATTCCGATGTTACTAACTGCGAATCATTGGCGCCTTCAAGTGTCTCGTGGGATTCTGATGAGGAAGGCTGTGTCTTGACCTTACTGGACTCAGAACTTGATCAAATACAGGAAAGACAGCTCTCAGTTTCTCTGCTTCACCAAAAAACATGGCTCAGAACTGCTCGTGAAGAAGCCATAAAATGGATGCTAAAGGTGCAAGGATATTTCAGTTTTACACCAGAGACGGCATGTCTATCTGTGAACTATCTTGACCGTTTTCTTTTGGCACACTCACTGCCGCAAGATGAGGCATGGCCTTTGCAGCTAGTAGCAGTTGCTTGTCTATCCGTGGCGGCGAAAATGGAAGAAACAAGTGTGCCACTTTTAGTGGACTTGCAAATGATAGAGCCTAGGTTCTTGTTTGAGCCTAAAACAGTTCAAAGAATGGAGCTTTTGGTTATGGCGGCTCTCAGGTGGCGATTGCGTGCTGTTACTCCTTTTGATTTTGCTCATCTTTTCATTGCTAAGGCTAATAAGAAGCTGTCATCATGCTCTGCCTCCTGTCACATTATTTCTCGTGTCTCAGATATTATAATCAGAACATGTTTAGTAATCGATTTCTTAGAGTATCCTCCATCTGTAATAGCAGCTTCTGCTCTGCTTTGGACAACAAATCATTATGTTAATGAACAGAGTCTAAGCTTCTTCCACGAAAATATAAGCAGAGAGATGGTGCAGAAATGTTACAACCTCATGAAGCAGAGGATTATTTTCAGAACAGAACATTTTGCAACAACGAATTCAGATTCTTTGCCCCTAAGCCCTACTTGTGTGCTTGATCACAAAGCCCTGACTTGA 918 0.4314 MSVSPNHHLVTLDLFCNEAASEVVSSDSDVTNCESLAPSSVSWDSDEEGCVLTLLDSELDQIQERQLSVSLLHQKTWLRTAREEAIKWMLKVQGYFSFTPETACLSVNYLDRFLLAHSLPQDEAWPLQLVAVACLSVAAKMEETSVPLLVDLQMIEPRFLFEPKTVQRMELLVMAALRWRLRAVTPFDFAHLFIAKANKKLSSCSASCHIISRVSDIIIRTCLVIDFLEYPPSVIAASALLWTTNHYVNEQSLSFFHENISREMVQKCYNLMKQRIIFRTEHFATTNSDSLPLSPTCVLDHKALT 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g00235 305 CDD CYCLIN_AtCycD-like_rpt2 184 272 - -
Accr10g00235 305 SMART Cyclin_C_2 184 294 IPR004367 -
Accr10g00235 305 PANTHER CYCLINS 73 274 IPR039361 -
Accr10g00235 305 CDD CYCLIN_AtCycD-like_rpt1 81 179 - -
Accr10g00235 305 Pfam Cyclin, C-terminal domain 184 276 IPR004367 -
Accr10g00235 305 Pfam Cyclin, N-terminal domain 64 181 IPR006671 -
Accr10g00235 305 ProSitePatterns Cyclins signature. 82 113 IPR006671 -
Accr10g00235 305 FunFam D6-type cyclin 180 270 - -
Accr10g00235 305 Gene3D - 72 182 - -
Accr10g00235 305 Gene3D - 183 269 - -
Accr10g00235 305 SUPERFAMILY Cyclin-like 166 278 IPR036915 -
Accr10g00235 305 FunFam D6-type cyclin 65 179 - -
Accr10g00235 305 SUPERFAMILY Cyclin-like 62 181 IPR036915 -
Accr10g00235 305 SMART cyclin_7 87 175 IPR013763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g00235 Accr-Chr10 4076090 4077432 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g00235 1 277 Core Cell Cycle Gene Families AT1G70210 41.924 8.35e-59 190
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g00235 K18810 - gmx:100799323 333.569