Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g00225 ATGGATACCTTGTTTCGTCTTGTTACTTTTCAATCTCAACCATCATCAACTGATCCTCACTCCCTCAACAACTCCTCTACCAGCACTAGATCCTCCACACACAACAACAACAACTTCTTCCACCACCACCAACAGCAAGACGACGAAGAATGCTTCAACTTTTTCATGGATGAAGAAGACTTGTCCTCCTCTTCTTCTAGACACTACTATCCTTATCATCATCACTCTCATCCGTCCTCCTCCTCCGCCGCTGCTGCCACCCCTACGGCCACCACCGCTGCTGCTACTTTCACCACCACGACTCCTACCACCTCTGATTTCTCCTTCTCCTTCTCCCCCACCACACTTGACCTCCACAATTTCGAATTCTCCGGCCGATGGGCTCACGACCTCCTCCTCGAAGCCGCCCGTGCCATCGCCGACAAGAACACCGCCCGTGTCCAGCAGTTAATCTGGATGCTCAATGAGCTCTCCAGTCCTTATGGTGACACCGATCAGAAGCTCGCCGCTTACTTCGTTCAGGCTCTTTTCAGTCGCGTCACCGACTCCGCCGACCGTACCTACCGTACGTTGGCCTCTGCGTCGGAGAAAACATGCTCTTTTGAGTCAACAAGGAAGATGGTGTTGAAGTTCCAAGAAGTAAGCCCATGGGCTACTTTTGGTCACGTCGCTTCCAATGGTGCCATATTAGAGGCCTTAGAAGGTGAGCCAAAGTTGCACATAGTTGATATTAGTGACACATATTGCACCCAGTGGCCTACTCTTCTAGAAGCCTTGGCCACTCGCAGCGATGACACCCCGCACCTCCGGTTAACCACGGTGGTTAGCCGCCGAGCCGGCGGCTCCATCGCAGCGGTTCAGAAAGTCATGAAGGAGATAGGGACTAGAATGGAGAAATTCGCTAGGCTCATGGGTGTGCCCTTTAAATTCAACGTCATTCACCACGCGGGTGATCTCTCGGACCTTAATTTATCCGAATTAGACATTAAAGAGGACGAGGCTCTAGCCATTAACTGTGTCAACACGTTACATTCCGTCACCGGGTTTGGTAATAACCGTGACTTGTTGATATCCTCGTTTCGGAGATTACAACCTAGGATAGTCACTGTGGTGGAAGATGAGGCTGATCTTGATGTTGGATTTCATGGGTTTGAATTTGTACGAGGTTTTCAAGAATGCTTGAGGTGGTTTAGGGTTTACTTCGAGGCGCTGGAAGAGAGCTTCCCTCGAGCGAGCAACGAACGTTTAATGCTAGAGAGATCGGCGGGAAGAGCCATCGTTGACTTGGTGGCTTGTGATCCATCGCAGTCTGTAGAACGGCGGGAGACTGCGGTTAGGTGGTCGCAGCGGCTGCATGGTCGTGGGTTCAACGCGGTGCCGTTCAGCGATGAGGTTTCCGACGACGTGAGAGCTCTGTTGAGGAGGTACAAGGAAGGGTGGGCAATAACACATTGCTCCGACGCCGGAATATTCTTGTCGTGGAAGGAACAGCCGGTGGTGTGGGCCAGTGCATGGAGACCTTGA 1524 0.5177 MDTLFRLVTFQSQPSSTDPHSLNNSSTSTRSSTHNNNNFFHHHQQQDDEECFNFFMDEEDLSSSSSRHYYPYHHHSHPSSSSAAAATPTATTAAATFTTTTPTTSDFSFSFSPTTLDLHNFEFSGRWAHDLLLEAARAIADKNTARVQQLIWMLNELSSPYGDTDQKLAAYFVQALFSRVTDSADRTYRTLASASEKTCSFESTRKMVLKFQEVSPWATFGHVASNGAILEALEGEPKLHIVDISDTYCTQWPTLLEALATRSDDTPHLRLTTVVSRRAGGSIAAVQKVMKEIGTRMEKFARLMGVPFKFNVIHHAGDLSDLNLSELDIKEDEALAINCVNTLHSVTGFGNNRDLLISSFRRLQPRIVTVVEDEADLDVGFHGFEFVRGFQECLRWFRVYFEALEESFPRASNERLMLERSAGRAIVDLVACDPSQSVERRETAVRWSQRLHGRGFNAVPFSDEVSDDVRALLRRYKEGWAITHCSDAGIFLSWKEQPVVWASAWRP 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g00225 507 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 93 496 IPR005202 -
Accr10g00225 507 ProSiteProfiles GRAS family profile. 119 506 IPR005202 -
Accr10g00225 507 MobiDBLite consensus disorder prediction 10 40 - -
Accr10g00225 507 Pfam GRAS domain family 130 506 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g00225 Accr-Chr10 4011113 4012636 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g00225 1 507 GRAS Transcription Factor Family AT4G37650 62.804 0.0 602
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Accr10g00225 GRAS 1.1e-107 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g00225 - - qsa:O6P43_033912 712.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr10g00225 10 4011113 4012636 Accr10g00225 10 4011113 4012636 ECH