Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g00212 ATGGGAGAAGAGTACGGAAGGACAGTGGTAGTGAGAGAGTTCGATCCCAATAAAGAGAGCGAGAAAGTGGAAGCAGTAGAAAGAATATGTGAAGTTGGACCCAGCGGGAAGCTCTCTCTCTTCACCGACCTCCTCGGTGATCCAATTTGCAGGGTCCGCCACTCCCCTGCTTTCTGCATGCTGGTGGCTGAGATAGGCGATGAGATTGCGGGAATGATAAGAGGTTGCATCAAAACCGTCACATGCGGAAAGAAGCTCCCCAGAAATAGGAACAAATCTCAGTTCACTGAAACCCTCCCTGTGTACACAAAAGTCGCCTACATCTTAGGTCTCCGCGTTTCTCCTTCTTACCGGAGAATGGGAATAGGGTTGAAGCTTGTGAATGCAATGGAGGAGTGGTTCAGAGGCAATGGAGCTGAATACTCTTACATGGCGACGGAAAAGGACAATTTAGCGTCCGTTATGCTCTTCACCGACAAATGCGGATACTCCAAGTTCCGTACACCGTCGATCCTCGTCAATCCGGTCTTCGCTCATCGGATTAGTATATCTCAGAAGATCAGTGTGATCCAACTCGGTCCCTCCGACGCCGAGAAGCTCTATCGCCGCCGATTCGCCACCACCGAGTTCTTCCCGCGCGACATTGGCTCCATCCTCAACAACAGACTCACCATTGGCACTTTCCTCGCCGTCCCGCGCGGGTCGTTTAGTCCAGACACGTGGCCCGGGTCGGACTTATTCCTCTCGGATCCACCCGAGTCATGGGCGGTTATCAGCGTCTGGAACTGTAAGGAAGTGTTCACGCTCGAGGTCCGAGGCGCATCGCGCGTGAAGCGTACCCTGGCCAAAACGACTCGGATTGTGGACCGGGCGCTGCCCTTTCTTCAGCTGCCGTCGATCCCGAATTTTTTCCAGCCGTTCGGGTTCCACTTTATGTATGGATTAGGAGGGCAAGGAGCTGAGGCGGCGAAGATGGTGAAGGCGTTGTGCGGTCACGCGCACAACCTCGCGAAGGAGCATGGGTGTGGGGCGGTTGTGACGGAGGTTTCGAGCTGTGAGCCGTTGAAGTTAGGAATACCGCACTGGAAGATGCTATCATGCGCCGAGGATTTATGGTGCATCAAGAGGCTCGGGGAAGACTATAGTGACGGCTCCGTCGGTGACTGGACAAAATCTCCACCTGGATTGTCCATATTCGTTGACCCTAGAGAATTCTAA 1218 0.5361 MGEEYGRTVVVREFDPNKESEKVEAVERICEVGPSGKLSLFTDLLGDPICRVRHSPAFCMLVAEIGDEIAGMIRGCIKTVTCGKKLPRNRNKSQFTETLPVYTKVAYILGLRVSPSYRRMGIGLKLVNAMEEWFRGNGAEYSYMATEKDNLASVMLFTDKCGYSKFRTPSILVNPVFAHRISISQKISVIQLGPSDAEKLYRRRFATTEFFPRDIGSILNNRLTIGTFLAVPRGSFSPDTWPGSDLFLSDPPESWAVISVWNCKEVFTLEVRGASRVKRTLAKTTRIVDRALPFLQLPSIPNFFQPFGFHFMYGLGGQGAEAAKMVKALCGHAHNLAKEHGCGAVVTEVSSCEPLKLGIPHWKMLSCAEDLWCIKRLGEDYSDGSVGDWTKSPPGLSIFVDPREF 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g00212 405 FunFam Probable N-acetyltransferase HLS1-like 18 170 - -
Accr10g00212 405 CDD NAT_SF 60 141 - -
Accr10g00212 405 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 7 405 - -
Accr10g00212 405 Gene3D - 43 169 - -
Accr10g00212 405 Pfam Acetyltransferase (GNAT) family 54 163 IPR000182 GO:0016747
Accr10g00212 405 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 9 184 IPR000182 GO:0016747
Accr10g00212 405 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 52 165 IPR016181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g00212 Accr-Chr10 3775021 3776534 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Accr10g00212 Acetyltransf_1 8.7e-19 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g00212 - - rcu:8283352 673.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr9g00431 9 4742535 4744215 Accr10g00212 10 3775021 3776534 CCT
Accr10g00212 10 3775021 3776534 Accr10g00212 10 3775021 3776534 ECH