Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g00209 ATGGAAGATCAGAATTTAATTCCACTACCTCCTCCCCCTTTTCCTGTGTCGGCATCAACGAGTTTGGCATGCGAATTAATGTTTGTGAACAATTTAACGCCAACAGGGTGCAGCTATGTGTCCACAGCAACAAGAGATTTGTGGGATCATCTTTTCGACGAAGCTTATAAGGCAGATGTTTTCATCAATACTCGTAATGGTGGTATTCTCTTTGCTCATTCTAACGTTCTTGGGATGGCTTCTCCAGTCTTGAAAGGCATGCTTAAGCAAGCAAGTCCCCGTCGTGGTCAGCGATCAATCTCCATTCTTGGGGTTCCACACGATGCCGTCAGAGTTTTTGTTCGATTCCTCTATTCTTCCTGCTATGAGGAAGAAGAAATGAAGGAATTGGTGTTGCCATTGTTGGTACTGTCACATGCATTTGTAGTCCCTCACTTGAATCGTGAATGTGAAGAGAAGCTGGAAACGAGTTTACTCACCATAGACAATCTAGTTGACGTAATTCAGCTTGCATTGTTATGTGATGCTACAAGGCTGACCCTAATTTGTTACCGAATGATTTCAAGCAATCTCAAACCTGTTTCAGAGTCCCAAGGTTGGAAGGCGCGCAATGAAGCAGAGTCACCCATTTCTGGAAACCCAACGTCTTGA 651 0.4393 MEDQNLIPLPPPPFPVSASTSLACELMFVNNLTPTGCSYVSTATRDLWDHLFDEAYKADVFINTRNGGILFAHSNVLGMASPVLKGMLKQASPRRGQRSISILGVPHDAVRVFVRFLYSSCYEEEEMKELVLPLLVLSHAFVVPHLNRECEEKLETSLLTIDNLVDVIQLALLCDATRLTLICYRMISSNLKPVSESQGWKARNEAESPISGNPTS 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g00209 216 Gene3D Potassium Channel Kv1.1; Chain A 37 159 IPR011333 -
Accr10g00209 216 SMART BTB_4 58 158 IPR000210 GO:0005515
Accr10g00209 216 Gene3D - 160 208 - -
Accr10g00209 216 PANTHER BTB/POZ AND TAZ DOMAIN-CONTAINING PROTEIN 3-RELATED 34 206 IPR044513 -
Accr10g00209 216 ProSiteProfiles BTB domain profile. 58 126 IPR000210 GO:0005515
Accr10g00209 216 SUPERFAMILY POZ domain 40 155 IPR011333 -
Accr10g00209 216 Pfam BTB/POZ domain 51 157 IPR000210 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g00209 Accr-Chr10 3719682 3720925 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Accr10g00209 BTB 6.4e-11 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g00209 - - qsa:O6P43_033903 259.225