Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g00208 ATGGCGGCCTCTGCGTCTTCGTTTTCTTTCTCCAGCCTTTTGTGTGAAGAAGATGAAGCTAGCATTTTGAAGGTCGGCGATGAGAATTCACGCATGGACTGGATAAACCCATGTTTTGTTTTCGAGAATGAAGAGGAATACATTGAGATTCTGTTTAAAAGAGAAATCGGGTTTGTATCCCCAAGTGATGATTGCTTAACAAGTGCAGCTAAATGGCTCAAAAATGCTCGTCTTGATGCTATTGACTGGATTTTCAGTACAGGGGCGAAATTCGGGTTTAAATTTCACACCATTTACTTATCAGTAACTTACTTCGATCGATTCCTTTCAAGGCGATCCATTGATGAAGGAAAAGATTGGGCCATTCAATTATTATCAATGGCATGTTTATCTTTGGCTGCAAAAATGGAAGAGCAGAACGTACCAACTCTATCTGAATTCCCAGGAAAAGAATATCACTTCGAGATTAAAGTGATTAAGAAAATGGAATTACTGATTTTGGATTCCTTGGGATGGAAAATGGGATCCGTGACTCCTTTTGCATATCTTCAGTACTTGGTCAAGAAATTTTCCTTGCAATCAAAACCAGAAGCAATAATCTCAAGAGCCATAGACCATATTATGGCAATCGTGAAAGATATTAGTTCAATAGATCAACGACCATCTGTTATTGCTTCTGCTGCCTTATTAGCAGCTTCTGATGCTACATTAACAAGACAAAGTGTGGATCTTTGTGTGAGCTCAATATCCTGGGGATCTCTTGAAAGTGAACTTGTATTTTCCTGCTACAATCTAATGCAGGAAATAGAGAGAAGGAAAATTAAGACTCCGGAGTCAAATTTGTTGTCAACCCATTCAACCTCCGCAGATGTTTTGGAGAATCCCTCTGTTCTTTCTTCTGGGACTAAGAGAAAACTTACTTTCCTAGACACTGGAACTGAAAGCTATCCTGAACAAAAGATACATCGGCCTTAG 975 0.3928 MAASASSFSFSSLLCEEDEASILKVGDENSRMDWINPCFVFENEEEYIEILFKREIGFVSPSDDCLTSAAKWLKNARLDAIDWIFSTGAKFGFKFHTIYLSVTYFDRFLSRRSIDEGKDWAIQLLSMACLSLAAKMEEQNVPTLSEFPGKEYHFEIKVIKKMELLILDSLGWKMGSVTPFAYLQYLVKKFSLQSKPEAIISRAIDHIMAIVKDISSIDQRPSVIASAALLAASDATLTRQSVDLCVSSISWGSLESELVFSCYNLMQEIERRKIKTPESNLLSTHSTSADVLENPSVLSSGTKRKLTFLDTGTESYPEQKIHRP 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g00208 324 PANTHER CYCLINS 41 275 IPR039361 -
Accr10g00208 324 Gene3D - 69 175 - -
Accr10g00208 324 CDD CYCLIN_AtCycD-like_rpt1 76 172 - -
Accr10g00208 324 SMART cyclin_7 82 168 IPR013763 -
Accr10g00208 324 CDD CYCLIN_AtCycD-like_rpt2 177 266 - -
Accr10g00208 324 ProSitePatterns Cyclins signature. 77 108 IPR006671 -
Accr10g00208 324 SUPERFAMILY Cyclin-like 36 174 IPR036915 -
Accr10g00208 324 Pfam Cyclin, N-terminal domain 50 174 IPR006671 -
Accr10g00208 324 FunFam Cyclin-D5-1 72 175 - -
Accr10g00208 324 Gene3D - 176 243 - -
Accr10g00208 324 Pfam Cyclin, C-terminal domain 177 276 IPR004367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g00208 Accr-Chr10 3693607 3694986 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g00208 9 251 Core Cell Cycle Gene Families AT4G37630 38.132 4.41e-45 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g00208 K18811 - gmx:100798140 362.459