LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Accr10g00167	ATGAAACCTCCTCGTATCATCTCCATGTTTTCTTTCCTTCTTCTTCTTCTTCAATTCTCCTCCTCCATGGCTTCAGCTTACACTGTTCCCGATAAGTATTTCATCAATTGCGGATCCAATCTCAACGTAGAAGACGGCGGCGATCGGGTTTTCGTTGGTGATGACTCCACTTCTGCTTCCGTCTGCTTTCCGAGGCAGAGCTCCGCCGTGAAGGAACGTAATAATTCGTCAACCACACCTCCCCTGTATCAAACCGCGAGAATCTTTCGTGTTCCATCTGGTTACCAGTTCAAAATCGGCGAAAACGAAGGCGGATGTTATCTGGTACGTCTCCATTTCTATGCTTTTTCGTCTGGAGAAACGCTTTCTAGTGCTCGATTCAATGTTGCCAGTGCCGGTTTCTTGTTGTTGGAGAATTTCAGTGCTGAAAATCAAACAAACTCTCTTTTTGTAAAGGAGTTTTATCTCAACATCAATAGCAAAACGAGCCTGCAAATCGATTTTTTCCCAGTGGAATCAGAATTCGCATTTGTAAACGCCATAGAACTCTTTCGAATCCCTGATAACTTTATCCCCAATATGGCATCACATGTTACTAGCAAAGGAAATACCAGTGATTACAAGAGCATTCACTCCTGGGTCTTACGTACGAGGTACAGGCTCGATGTTGGTAATTCTGGTAGTTCCGTGGAAATGTACGATACCTTGCGGAGAAGATGGGAAAAAGATGGTCCATACGCTAAAAATGGAACAGAGTTTTCTAGCTCCGTTGCTATTAATTACCTCGTCCGAGGAGAAGATAATAATAATGGTTCGGAAGAAAATGGTGTTGCCGTTTTCGCTTCCACTGATGTTACAGCCCCAGAAATTGTTTACCAGACAGCCAGAGTGATGACTCCAAACTCTTCAGGCATCGTTGGTAAATCTTTTAACATATCATGGTCACTTCAGGTGAAGAGCAATTATAGTTATTTCATTCGAGCTCACTTTTGTGACATTACCAGTATGGGCATGGGTCTTACATACTTCAATTTTTATATCTACGACCACTTCAATTGGTCGGTCCATACCGATTGGTTGGAGTCTTCTGTTCCTATTTATCGTGATTTTGTTGTGGATTCTGATGACTCTGGGAATTTGACGTTCAGTGTTGGCCCTGATGAATCATCATATGTTAGAAATGCTTTCTTGAATGGTCTTGAAGTGATGGAAATCATTACAACTCGAGGTCAACCTGCAATTGTAGCCGATTACCAATGCAAGAAGGAAAATCACATTAATCGTCTTGTTCTGGAGTTGGTGCTTGGATCATTTGCTCTGATTTGCATTATGGTGGTTTTGTTCTGTTTGATCTGGAAATATAGAAAATCAAAGATTATTAGAAATCTGGATTGGGCCCCACTTTCTGTTCAAGGAGGAGGAAGTTCACATGGCAAAAGAGGAAGCAGCCATGGCTCATCTCTTGGCAACTTAAAACTTGGACTGAAGATGTCTTTTAACGAGATTCAAACTGCAACAAACAATTTCCACAGAAAACGGATTATTGGCAAGGGTGGATTTGGAAATGTGTACAAGGGAATTCTCAAGAATGGTGTGAAAATAGCAGTGAAGAGAAGTGAACCAGGTTCAGGACAAGGATTCCCAGAATTCCAGACAGAGATCATGGTCTTGTCGCGAATTCGCCACCGTCATCTTGTTTCGTTAATTGGGTACTGTGACGAGAAGTCAGAGATGATTCTGGTTTTTGAGTACATGGAAAACGGAACACTCAGAGATCACTTGTACCATTCAGATCTACCAAGCTTAAGCTGGAAACAGAGGATTGAAATCTGCATTGGAGCAGCACGAGGTCTGAACTATCTTCATAAAGGAGCAGCCGGCGGAATCATCCACCGTGACGTGAAGTCAACAAACATATTACTCGACGAAAACCATGTTGCTAAGGTTGCCGACTTTGGCCTGTCAAAAACAGGCCCTCTTGATCACCAACAACCATCAGTGACCACAGGTGTTAAGGGCACTTTTGGGTATCTTGATCCTGAATATTTCAGAACTCAACAATTAACAGAAAAATCTGATGTTTACTCATTTGGGGTGGTTCTTCTTGAAGTGCTATGTGCAAGACCAGCCCTTGATCCTACACTTCCATGGAGCCAAGTGAACTTAGCTGAGTGGGGAATGTTCTGCAAGCGAAGAGGGACATTAGAAGAACTGATAGATCCGAGGATAAAGGACCAGATTGATCCGAACTCGCTGAGGAAGTTCAATGAGACAGTGGAGAAATGTCTGGAAGAAGAAGGGAGTGACAGACCAACGATGGGTGATGTGCTGTGGGATTTGGAATATTCACTGCAACTTCAGAGAGGAGCGAGAAAGAGGAACTTATCAGGAGAGGATAGTAATAATACAGGAACCGGAGCATCAATTGAACTGTCCAACGTAAGACGCCTTCCTTCACTGTCGACACAAGTTGATTCAGAAGTGATGTCTATTTTGAGCGATGATAGTGCAGCACACACTGTTTTCTCCATGTCCAATTTTTCTCAACGTACCAGATAA	2559	0.4279	MKPPRIISMFSFLLLLLQFSSSMASAYTVPDKYFINCGSNLNVEDGGDRVFVGDDSTSASVCFPRQSSAVKERNNSSTTPPLYQTARIFRVPSGYQFKIGENEGGCYLVRLHFYAFSSGETLSSARFNVASAGFLLLENFSAENQTNSLFVKEFYLNINSKTSLQIDFFPVESEFAFVNAIELFRIPDNFIPNMASHVTSKGNTSDYKSIHSWVLRTRYRLDVGNSGSSVEMYDTLRRRWEKDGPYAKNGTEFSSSVAINYLVRGEDNNNGSEENGVAVFASTDVTAPEIVYQTARVMTPNSSGIVGKSFNISWSLQVKSNYSYFIRAHFCDITSMGMGLTYFNFYIYDHFNWSVHTDWLESSVPIYRDFVVDSDDSGNLTFSVGPDESSYVRNAFLNGLEVMEIITTRGQPAIVADYQCKKENHINRLVLELVLGSFALICIMVVLFCLIWKYRKSKIIRNLDWAPLSVQGGGSSHGKRGSSHGSSLGNLKLGLKMSFNEIQTATNNFHRKRIIGKGGFGNVYKGILKNGVKIAVKRSEPGSGQGFPEFQTEIMVLSRIRHRHLVSLIGYCDEKSEMILVFEYMENGTLRDHLYHSDLPSLSWKQRIEICIGAARGLNYLHKGAAGGIIHRDVKSTNILLDENHVAKVADFGLSKTGPLDHQQPSVTTGVKGTFGYLDPEYFRTQQLTEKSDVYSFGVVLLEVLCARPALDPTLPWSQVNLAEWGMFCKRRGTLEELIDPRIKDQIDPNSLRKFNETVEKCLEEEGSDRPTMGDVLWDLEYSLQLQRGARKRNLSGEDSNNTGTGASIELSNVRRLPSLSTQVDSEVMSILSDDSAAHTVFSMSNFSQRTR	852

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Accr10g00167	852	FunFam	receptor-like protein kinase FERONIA	475	584	-	-
	Accr10g00167	852	ProSitePatterns	Protein kinases ATP-binding region signature.	515	537	IPR017441	GO:0005524
	Accr10g00167	852	Gene3D	Transferase(Phosphotransferase) domain 1	585	802	-	-
	Accr10g00167	852	ProSiteProfiles	Protein kinase domain profile.	509	783	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Accr10g00167	852	Pfam	Protein tyrosine and serine/threonine kinase	511	777	IPR001245	GO:0004672\|GO:0006468
	Accr10g00167	852	MobiDBLite	consensus disorder prediction	796	810	-	-
	Accr10g00167	852	Pfam	Malectin-like domain	35	404	IPR024788	-
	Accr10g00167	852	SUPERFAMILY	Protein kinase-like (PK-like)	496	778	IPR011009	-
	Accr10g00167	852	MobiDBLite	consensus disorder prediction	791	810	-	-
	Accr10g00167	852	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	629	641	IPR008271	GO:0004672\|GO:0006468
	Accr10g00167	852	PANTHER	OS07G0166700 PROTEIN	496	787	IPR045272	GO:0004714\|GO:0006468
	Accr10g00167	852	CDD	STKc_IRAK	515	781	-	-
	Accr10g00167	852	Gene3D	Phosphorylase Kinase; domain 1	478	584	-	-
	Accr10g00167	852	FunFam	FERONIA receptor-like kinase	32	187	-	-
	Accr10g00167	852	SMART	serkin_6	509	783	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Accr10g00167	852	Gene3D	-	32	186	-	-
	Accr10g00167	852	Gene3D	-	216	406	-	-
	Accr10g00167	852	FunFam	Receptor-like protein kinase FERONIA	585	802	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Accr10g00167	Accr-Chr10	3043969	3046527	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Accr10g00167	13	809	Receptor kinase-like Gene Family	AT2G23200	46.683	0.0	648

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_CrRLK1L-1	Accr10g00167		Malectin_like	3.8e-32	CL0202

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Accr10g00167	-		-	qsa:O6P43_033868	813.913