Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g00152 ATGTTTCATTCGAAAAATCTCTTTCCTCTCTTCTTCTTCTTCTGCTTCACTCTCACCACTGTCTTCTCCGATCAGTCTTCTCCGGCTTCCTCCAATCTGGTCCTCTCCTCCGACGCCGTTTCATTGCTCTCTTTCAAGTCCAAAGCCGACCTCGACAACAAGCTTCTCTATGCTCTTCACGAGCGCTTCGATTACTGTCAATGGCAAGGCGTCAAATGCGCACAGGGCCGAGTGGTTCGCTTCTTCCTTCAGGGCTCTGGTCTTCGCGGCGTCTTCGCTTCCGACACCCTCTCTCGCCTCGACCAGCTTCGAGTCCTCTGCCTCCAAAATAATTCCCTTTCCGGTCCCATCCCCGATCTCTCTCCCCTCTTCAACCTCAAGGGTCTCCTTCTCGACCATAATTTTTTCTCTGGTTCATTACCTCCTTCGTTTCTTTTGCTTCATCGCCTTCGTACCCTTTCTCTATCTTATAACAACCTTACTGGTTTGATCCCTGTCGAGTTAGTTAGTTTGGACCGTTTAGTAACCCTCCGCCTTGACTCGAACCACTTTAATGGAACTGTTCCGCCGTTGAACCAGTCCTCCCTTCTTATCTTCAATGTCTCCGGCAATAACCTTACAGGGCCGATTCCGGAAACTTTAACTCTAGCTCGATTCCACACGGCGTCGTTTTATGGGAATCCAGGTCTATGCGGGGACATTATTTCCAAAGCATGTGATCATCTTCGGCCTCCAATCCTTGGTTCTTCCAATGCCCCTGTCTACTTGGGGCAAAGCGCCGAATCACAGGGAAACATCGTCGTTTCTTCGCTGAGTAGAAAGAAGCACAAGAGTAACGGCCTGATTATTGGGTCCACCATTGGTACGTTGATTCTGATTGCGTCTTTTCTAGGGTTTATCGCGATGGTTAGGAAACGGAGTGTTTCGAGTAAATTAGAAAACCCAAAAATGGCGGCAATGGGATCCATGGATGCTTCGCCGGGGAAGAAAATTGAGGAAATCGATGTTGTTGATAATCATAATAGAGAGAATTTGGTGTTCTGTTGTGGGGAGGCACAATTGTATACGCTGGATCAGTTGATGAGAGGGTCGGCCGAGTTACTGGGAAGGGGTACAATTGGGACTACGTACAAAGCAGTGGTGGATGGCAGATTCTTTTTGACAGTAAAGAGGCTAGATGCTGGGAAGACTGCAAGAGCAAGTGGTAATTTTGAGAGGCACATGGAAATGGTGGGTCAGCTTCGGCATCCAAATTTAGTACCGGTTAGAGCTTATTTTCAGGCTGAAGCAGAGAGGCTGGTGATCTATGATTATCAATCCAACGGCAGCCTCTTCAACCTTATTCATGGTTCAAGATCAGCAAGAGCAAAGCCTCTTCACTGGACATCATGCTTGAAGATAGCTGAAGACATAGCTCATGGACTTGCATATATCCACCAAACATCAAGATTAATCCACGGCAACCTAAAGTCCTCTAATGTCCTTCTTGGAGTGGACTTTGAAGCTCGTGTTGCAGACTATAGCCTGTCCCTCCTTTCAAACTCTTCATCCAGTGATGATCCTGATACTGCTGCCTATAAAGCACCCGAAACTCGCAACACTAATCGCCTACCTACTTCTAAATCTGATGTCTATACATTTGGGGTACTTCTGCTGGAGCTTCTAACTTCCAAATACCCTTCTCAGCATCCCTTCCTTGTGCCTATGGATCTGCAGAATTGGGTCAGAGCAATGAGGAATGACTATGGTGCTGAAGATAAGCAGCTAGGAATGCTTACAGACCTCGCAAGTATTTGCACTGTCATATCACCTGAGCAGAGACCAGCTATGTGGCAAGTCTTGAAGATGATACAGGAAATTAAGAAGAGTGTAACATTTGAAGGTAATATATCTACTGGGTTTATATAG 1908 0.4659 MFHSKNLFPLFFFFCFTLTTVFSDQSSPASSNLVLSSDAVSLLSFKSKADLDNKLLYALHERFDYCQWQGVKCAQGRVVRFFLQGSGLRGVFASDTLSRLDQLRVLCLQNNSLSGPIPDLSPLFNLKGLLLDHNFFSGSLPPSFLLLHRLRTLSLSYNNLTGLIPVELVSLDRLVTLRLDSNHFNGTVPPLNQSSLLIFNVSGNNLTGPIPETLTLARFHTASFYGNPGLCGDIISKACDHLRPPILGSSNAPVYLGQSAESQGNIVVSSLSRKKHKSNGLIIGSTIGTLILIASFLGFIAMVRKRSVSSKLENPKMAAMGSMDASPGKKIEEIDVVDNHNRENLVFCCGEAQLYTLDQLMRGSAELLGRGTIGTTYKAVVDGRFFLTVKRLDAGKTARASGNFERHMEMVGQLRHPNLVPVRAYFQAEAERLVIYDYQSNGSLFNLIHGSRSARAKPLHWTSCLKIAEDIAHGLAYIHQTSRLIHGNLKSSNVLLGVDFEARVADYSLSLLSNSSSSDDPDTAAYKAPETRNTNRLPTSKSDVYTFGVLLLELLTSKYPSQHPFLVPMDLQNWVRAMRNDYGAEDKQLGMLTDLASICTVISPEQRPAMWQVLKMIQEIKKSVTFEGNISTGFI 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g00152 635 FunFam Probable inactive receptor kinase At5g67200 37 147 - -
Accr10g00152 635 ProSiteProfiles Protein kinase domain profile. 362 626 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr10g00152 635 Pfam Leucine rich repeat 125 184 IPR001611 GO:0005515
Accr10g00152 635 FunFam Leucine-rich repeat receptor-like protein kinase 149 241 - -
Accr10g00152 635 Gene3D Ribonuclease Inhibitor 35 193 IPR032675 -
Accr10g00152 635 SUPERFAMILY L domain-like 44 232 - -
Accr10g00152 635 ProSiteProfiles Leucine-rich repeat profile. 149 170 IPR001611 GO:0005515
Accr10g00152 635 Pfam Protein kinase domain 366 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr10g00152 635 MobiDBLite consensus disorder prediction 514 537 - -
Accr10g00152 635 Gene3D Ribonuclease Inhibitor 194 242 IPR032675 -
Accr10g00152 635 Gene3D Phosphorylase Kinase; domain 1 351 438 - -
Accr10g00152 635 SUPERFAMILY Protein kinase-like (PK-like) 366 621 IPR011009 -
Accr10g00152 635 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 11 622 IPR046959 -
Accr10g00152 635 Gene3D Transferase(Phosphotransferase) domain 1 440 630 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g00152 Accr-Chr10 2742054 2745388 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g00152 35 626 Receptor kinase-like Gene Family AT3G50230 53.429 0.0 600
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Accr10g00152 Pkinase 1.2e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g00152 - - qsa:O6P43_033846 791.186