Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g00146 ATGGAAGCTGAACAGGCGGCTTTAGGCGCCAAGAAGAGAGGGGTCGAAGGAGAGAGAAGGTACAAAGGGATTAGGATGAGGAAGTGGGGCAAGTGGGTCGCTGAAATCAGAGAACCGAATAAACGTTCTCGGATTTGGCTCGGATCCTATTCTACACCTGTCGCTGCCGCCAGAGCCTACGACACCGCCGTTTTCTATCTCAGAGGACCTTCCGCTCGCCTTAATTTCCCGGACCTCCTTGCTGGAGAAGGCTGCTTGGCCGCTGCCGGTGACTTGTCCTCGGCCTCGATTCGCAAGAAAGCCATCGAAGTCGGCGCTAGGGTGGATGCCCTTCACTCGGATCACCACCATCAGCATCAGCATCAGCACCACGCGTCGGCGAAGGCATCGGAGCTCATGCCTCGCGGCACCGGAGCGAGCGTGGTTGACCTGAACAAGATGCCGGAACCGGAGAATCCGGAGTGCAACTGA 471 0.5775 MEAEQAALGAKKRGVEGERRYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSTPVAAARAYDTAVFYLRGPSARLNFPDLLAGEGCLAAAGDLSSASIRKKAIEVGARVDALHSDHHHQHQHQHHASAKASELMPRGTGASVVDLNKMPEPENPECN 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g00146 156 Gene3D AP2/ERF domain 19 78 IPR036955 GO:0003700|GO:0006355
Accr10g00146 156 SUPERFAMILY DNA-binding domain 20 78 IPR016177 GO:0003677
Accr10g00146 156 ProSiteProfiles AP2/ERF domain profile. 20 77 IPR001471 GO:0003700|GO:0006355
Accr10g00146 156 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-1-RELATED 10 153 - -
Accr10g00146 156 MobiDBLite consensus disorder prediction 112 134 - -
Accr10g00146 156 CDD AP2 20 79 IPR001471 GO:0003700|GO:0006355
Accr10g00146 156 PRINTS Ethylene responsive element binding protein signature 59 79 IPR001471 GO:0003700|GO:0006355
Accr10g00146 156 PRINTS Ethylene responsive element binding protein signature 21 32 IPR001471 GO:0003700|GO:0006355
Accr10g00146 156 FunFam Ethylene-responsive transcription factor 2 19 78 - -
Accr10g00146 156 SMART rav1_2 20 83 IPR001471 GO:0003700|GO:0006355
Accr10g00146 156 Pfam AP2 domain 20 69 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g00146 Accr-Chr10 2586134 2586604 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g00146 7 154 AP2-EREBP Transcription Factor Family AT2G23340 58.824 8.62e-54 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Accr10g00146 AP2 9.6e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g00146 K09286 - gmx:100784157 198.364
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr9g00365 9 4086724 4087281 Accr10g00146 10 2586134 2586604 CCT
Accr10g00146 10 2586134 2586604 Accr10g00146 10 2586134 2586604 ECH