Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g00139 ATGGCGTCGTCGAAGGCGCCTCCTCCGCCTTCCGCCTCTGCTGACGCACCGGACTCTCCCAAGGGACAATCGACAAAGAGAGAGCAAGACGCTGATTATACTCCTAAGGATGTGCAATCGGTTATTGATTCTTTGAAAAAACTAGTCGCTGCTGAGAGGGGCATTTCCATAAAGAAGACTATGGAAGAAAGTAAAGCCAAGCTGGCTGGCGTTACAAACCATCTCTATCAGTTATCAATGGAAAGAAGATCCTGCAGCAGTACTGGTACACAGAGAAGTCTGGACCTACTGACAAGGAGGCAGCAAGATGCAATTGCTATGCACAATGATATTCATGCAAGCAAAGGAGATGAGGAGAGTAATGGCTATCATGAAGATAACCATGCTTCTACTGCTGTTCTTTTAGGTTCCAATGTAGCTGTAAAAAATGCTGTTCGCCCTGTTAAACTACCTGAAGTAAAAAGATTACCTCCTTACACTACATGGATTTTTCTGGACAGAAATCAAAGAATGACTGAGGATCAGTCAGTAGTAGGTCGAAGGCGAATTTATTATGATCAAAATGGTGGAGAAGCACTTATTTGCAGTGATAGTGAGGAGGAAATAATAGAGGACAAAGAAGAAAGAGAATTTGTAGAATCGGAAGATTATATACTTCGCATGACTACCAAAAAATTTGGTTTGTCTGATCTTGTTGTGGAATCACTGGCCCGGTGTTTTTCTAGAAATGCTTGTGACATTAAGGCAAGATTTGAAGTTATCAGTTGTGAAAACGATGCTGAAAAGAGTTCTCAAGTTGGAAATTCGTTTCTGGACAAGGATCTTGAAGCAGCTCTTGATTCCTTTGACAACCTCTTTTGTCGACGATGTCTTCAGGCTTTTGATTGTAGATTGCATGGATGTTCACAGGATCTCATCTTCCCTGCTGAGAAACAATCTGCATGGATGCCTCCTGATGCTGAAATTGCACCTTGTGGACCAAATTGTTTTCAATTGGTGCTGAAGTCTGAAAGGTTTGCCAAAGTTACCTCTTCTGCCCTAGGTGATGATGAAGAGAAATGCTCAAGTGGTGCTGGGATGCAAAAATCATCTAGGAAGAAGTTGTGTACTCCATCTGCTAGAAGGCGAATAAAGTCGAGCCGAAGTGAAAGTGCTTCCTCAAATGCAAAGAACATATCTGAGAGTAGTGACTCAGAGAATGGCCCAGGGCAGAATAATGATTCACCTTCCCAGTCAATACCTAAAACTAAAGCTATGGGTAAAAGTGGAGTTAGTAAGAGGAACAGTAAGCGAGTGGCAGAACGTGTACTAGTTTCCATGCAGAAGAGGCAGAAGAAAACTGTTGCGTCTGACTCTGATTCCATTGGTGAAGCTTTTGATCATTCTTCAAACGAGATGGTCCTTGACCGCCCTGTCACAAGTAGAGATGAGAACCTGAGGAAAGAAGAGTGTGCGAATGAGAATATATGCAATCAGGAATTCACTGATAATAAATCATGGAAAACTCTTGAAAAAGCCCTTCTAGACAAAGGGATGGAAATATTTGGTAGAAACAGCTGTCTAATAGCAAGGAATCTCTTAGCTGGTCTGAAGACATGTTGGGAGGTTTTCCAATATATAAATTGTAATGAGGGAAAGATGCCAGGTCCTGTTGGTGATGCTGTAAATTCCCTCCTGGAAGGCTATTCAAAGGGTAACAATGAATTGAGACGGAGATCAAGGTTTTTACGTAGAAGAGGAAGAGTCCGTCGATTGAAGTATACCTGGAAATCTGCTGCTTATCATTCAATCAGGAAAAGGATTACAGAGAGAAAGGATCAGCCCTGTCGTCAATATAACCCATGTGGTTGCCAATCAGCTTGTGGAAAGCAGTGTCCTTGCCTTCAAAATGGAACCTGCTGTGAAAAGTATTGTGGTTGCCCCAAGAGTTGCAAGAATAGATTTCGTGGCTGTCATTGTGCTAAGAGCCAATGCCGAAGTCGACAATGCCCATGCTTCGCTGCCGATAGGGAATGTGATCCTGATGTTTGTAGAAATTGTTGGGTTGGCTGTGGTGATGGCACTCTTGGGATTCCCAGCCAAAGGGGTGATAATTATGAATGTAGGAATATGAAACTTCTTCTCAAACAGCAGCAAAGGGTTCTTCTTGGGACGTCTGATGTATCTGGTTGGGGAGCCTTCTTAAAGAACAGCGTTGGGAAGCATGAATACCTTGGAGAGTATACCGGAGAGTTAATATCGCATAGGGAGGCAGATAAGCGTGGAAAAATATATGATCGGGAGAATTCATCTTTTCTCTTTAATCTGAATGATCAGTTTGTTCTTGATGCTTATCGGAAGGGTGACAAATTGAAGTTTGCCAATCATTCTCCTGATCCAAATTGCTATGCAAAGGTTATAATGGTAGCTGGGGATCATAGGGTAGGCATTTTTGCCAAGGAACGGATTAATGCTGGGGAGGAACTGTTCTATGATTATCGCTATGAACCGGATAGAGCTCCTGCCTGGGCCCGCAAGCCTGAGGCGTCTGGCTCGAAAAAAGACGATGGTGCTCCTTCAAGTGGTCGTGCAAAGAAGCTTGCTTAA 2586 0.4308 MASSKAPPPPSASADAPDSPKGQSTKREQDADYTPKDVQSVIDSLKKLVAAERGISIKKTMEESKAKLAGVTNHLYQLSMERRSCSSTGTQRSLDLLTRRQQDAIAMHNDIHASKGDEESNGYHEDNHASTAVLLGSNVAVKNAVRPVKLPEVKRLPPYTTWIFLDRNQRMTEDQSVVGRRRIYYDQNGGEALICSDSEEEIIEDKEEREFVESEDYILRMTTKKFGLSDLVVESLARCFSRNACDIKARFEVISCENDAEKSSQVGNSFLDKDLEAALDSFDNLFCRRCLQAFDCRLHGCSQDLIFPAEKQSAWMPPDAEIAPCGPNCFQLVLKSERFAKVTSSALGDDEEKCSSGAGMQKSSRKKLCTPSARRRIKSSRSESASSNAKNISESSDSENGPGQNNDSPSQSIPKTKAMGKSGVSKRNSKRVAERVLVSMQKRQKKTVASDSDSIGEAFDHSSNEMVLDRPVTSRDENLRKEECANENICNQEFTDNKSWKTLEKALLDKGMEIFGRNSCLIARNLLAGLKTCWEVFQYINCNEGKMPGPVGDAVNSLLEGYSKGNNELRRRSRFLRRRGRVRRLKYTWKSAAYHSIRKRITERKDQPCRQYNPCGCQSACGKQCPCLQNGTCCEKYCGCPKSCKNRFRGCHCAKSQCRSRQCPCFAADRECDPDVCRNCWVGCGDGTLGIPSQRGDNYECRNMKLLLKQQQRVLLGTSDVSGWGAFLKNSVGKHEYLGEYTGELISHREADKRGKIYDRENSSFLFNLNDQFVLDAYRKGDKLKFANHSPDPNCYAKVIMVAGDHRVGIFAKERINAGEELFYDYRYEPDRAPAWARKPEASGSKKDDGAPSSGRAKKLA 861
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g00139 861 ProSiteProfiles CXC domain profile. 598 697 IPR026489 -
Accr10g00139 861 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) 30 859 IPR045318 GO:0006338|GO:0042054
Accr10g00139 861 MobiDBLite consensus disorder prediction 439 458 - -
Accr10g00139 861 CDD SET_EZH 712 828 - -
Accr10g00139 861 Pfam SET domain 723 826 IPR001214 GO:0005515
Accr10g00139 861 Pfam CXC domain 650 681 IPR041355 -
Accr10g00139 861 ProSiteProfiles SET domain profile. 712 827 IPR001214 GO:0005515
Accr10g00139 861 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 1 861 IPR025778 GO:0031519
Accr10g00139 861 Coils Coil 195 215 - -
Accr10g00139 861 MobiDBLite consensus disorder prediction 835 861 - -
Accr10g00139 861 MobiDBLite consensus disorder prediction 1 38 - -
Accr10g00139 861 Gene3D SET domain 612 829 IPR046341 -
Accr10g00139 861 MobiDBLite consensus disorder prediction 835 854 - -
Accr10g00139 861 FunFam Putative histone-lysine N-methyltransferase EZH2 612 829 - -
Accr10g00139 861 MobiDBLite consensus disorder prediction 382 418 - -
Accr10g00139 861 SMART CXC_2 646 683 IPR033467 -
Accr10g00139 861 SMART set_7 712 833 IPR001214 GO:0005515
Accr10g00139 861 MobiDBLite consensus disorder prediction 349 431 - -
Accr10g00139 861 SUPERFAMILY SET domain 586 832 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g00139 Accr-Chr10 2480640 2490078 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g00139 701 830 C2H2 Transcription Factor Family AT2G23740 26.531 7.41e-09 57.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Accr10g00139 SET 4.8e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g00139 - K11430 gmx:100799832 1348.57