Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g00138 ATGGCGTCGTCGAAGGCGCCTCCTCCGCCTTCCGCCTCTGCTGACGCACCGGACTCTCCCAAGGGACAATCGACAAAGAGAGAGCAAGACGCTGATTATACTCCTAAGGATGTGCAATCGGTTATTGATTCTTTGAAAAAACTAGTCGCTGCTGAGAGGGGCATTTCCATAAAGAAGACTATGGAAGAAAGTAAAGCCAAGCTGGCTGGCGTTACAAACCATCTCTATCAGTTATCAATGGAAAGAAGATCCTGCAGCAGTACTGGTACACAGAGAAGTCTGGACCTACTGACAAGGAGGCAGCAAGATGCAATTGCTATGCACAATGATATTCATGCAAGCAAAGGAGATGAGGAGAGTAATGGCTATCATGAAGATAACCATGCTTCTACTGCTGTTCTTTTAGGTTCCAATGTAGCTGTAAAAAATGCTGTTCGCCCTGTTAAACTACCTGAAGTAAAAAGATTACCTCCTTACACTACATGGATTTTTCTGGACAGAAATCAAAGAATGACTGAGGATCAGTCAGTAGTAGGTCGAAGGCGAATTTATTATGATCAAAATGGTGGAGAAGCACTTATTTGCAGTGATAGTGAGGAGGAAATAATAGAGGACAAAGAAGAAAGAGAATTTGTAGAATCGGAAGATTATATACTTCGCATGACTACCAAAAAATTTGGTTTGTCTGATCTTGTTGTGGAATCACTGGCCCGGTGTTTTTCTAGAAATGCTTGTGACATTAAGGCAAGATTTGAAGTTATCAGTTGTGAAAACGATGCTGAAAAGAGTTCTCAAGTTGGAAATTCGTTTCTGGACAAGGATCTTGAAGCAGCTCTTGATTCCTTTGACAACCTCTTTTGTCGACGATGTCTTGCTTTTGATTGTAGATTGCATGGATGTTCACAGGATCTCATCTTCCCTGCTGAGAAACAATCTGCATGGATGCCTCCTGATGCTGAAATTGCACCTTGTGGACCAAATTGTTTTCAATTGGTGCTGAAGTCTGAAAGGTTTGCCAAAGTTACCTCTTCTGCCCTAGGTGATGATGAAGAGAAATGCTCAAGTGGTGCTGGGATGCAAAAATCATCTAGGAAGAAGTTGTGTACTCCATCTGCTAGAAGGCGAATAAAGTCGAGCCGAAGTGAAAGTGCTTCCTCAAATGCAAAGAACATATCTGAGAGTAGTGACTCAGAGAATGGCCCAGGGCAGAATAATGATTCACCTTCCCAGTCAATACCTAAAACTAAAGCTATGGGTAAAAGTGGAGTTAGTAAGAGGAACAGTAAGCGAGTGGCAGAACGTGTACTAGTTTCCATGCAGAAGAGGCAGAAGAAAACTGTTGCGTCTGACTCTGATTCCATTGGTGAAGCTTTTGATCATTCTTCAAACGAGATGGTCCTTGACCGCCCTGTCACAAGTAGAGATGAGAACCTGAGGAAAGAAGAGTGTGCGAATGAGAATATATGCAATCAGGAATTCACTGATAATAAATCATGGAAAACTCTTGAAAAAGCCCTTCTAGACAAAGGGATGGAAATATTTGGTAGAAACAGCTGTCTAATAGCAAGGAATCTCTTAGCTGGTCTGAAGACATGTTGGGAGGTTTTCCAATATATAAATTGTAATGAGGGAAAGATGCCAGGTCCTGTTGGTGATGCTGTAAATTCCCTCCTGGAAGGCTATTCAAAGGGTAACAATGAATTGAGACGGAGATCAAGGTTTTTACGTAGAAGAGGAAGAGTCCGTCGATTGAAGTATACCTGGAAATCTGCTGCTTATCATTCAATCAGGAAAAGGATTACAGAGAGAAAGGATCAGCCCTGTCGTCAATATAACCCATGTGGTTGCCAATCAGCTTGTGGAAAGCAGTGTCCTTGCCTTCAAAATGGAACCTGCTGTGAAAAGTATTGTGGTTGCCCCAAGAGTTGCAAGAATAGATTTCGTGGCTGTCATTGTGCTAAGAGCCAATGCCGAAGTCGACAATGCCCATGCTTCGCTGCCGATAGGGAATGTGATCCTGATGTTTGTAGAAATTGTTGGGTTGGCTGTGGTGATGGCACTCTTGGGATTCCCAGCCAAAGGGGTGATAATTATGAATGTAGGAATATGAAACTTCTTCTCAAACAGCAGCAAAGGGTTCTTCTTGGGACGTCTGATGTATCTGGTTGGGGAGCCTTCTTAAAGAACAGCGTTGGGAAGCATGAATACCTTGGAGAGTATACCGGAGAGTTAATATCGCATAGGGAGGCAGATAAGCGTGGAAAAATATATGATCGGGAGAATTCATCTTTTCTCTTTAATCTGAATGATCAGTTTGTTCTTGATGCTTATCGGAAGGGTGACAAATTGAAGTTTGCCAATCATTCTCCTGATCCAAATTGCTATGCAAAGGTTATAATGGTAGCTGGGGATCATAGGGTAGGCATTTTTGCCAAGGAACGGATTAATGCTGGGGAGGAACTGTTCTATGATTATCGCTATGAACCGGATAGAGCTCCTGCCTGGGCCCGCAAGCCTGAGGCGTCTGGCTCGAAAAAAGACGATGGTGCTCCTTCAAGTGGTCGTGCAAAGAAGCTTGCTTAA 2583 0.4305 MASSKAPPPPSASADAPDSPKGQSTKREQDADYTPKDVQSVIDSLKKLVAAERGISIKKTMEESKAKLAGVTNHLYQLSMERRSCSSTGTQRSLDLLTRRQQDAIAMHNDIHASKGDEESNGYHEDNHASTAVLLGSNVAVKNAVRPVKLPEVKRLPPYTTWIFLDRNQRMTEDQSVVGRRRIYYDQNGGEALICSDSEEEIIEDKEEREFVESEDYILRMTTKKFGLSDLVVESLARCFSRNACDIKARFEVISCENDAEKSSQVGNSFLDKDLEAALDSFDNLFCRRCLAFDCRLHGCSQDLIFPAEKQSAWMPPDAEIAPCGPNCFQLVLKSERFAKVTSSALGDDEEKCSSGAGMQKSSRKKLCTPSARRRIKSSRSESASSNAKNISESSDSENGPGQNNDSPSQSIPKTKAMGKSGVSKRNSKRVAERVLVSMQKRQKKTVASDSDSIGEAFDHSSNEMVLDRPVTSRDENLRKEECANENICNQEFTDNKSWKTLEKALLDKGMEIFGRNSCLIARNLLAGLKTCWEVFQYINCNEGKMPGPVGDAVNSLLEGYSKGNNELRRRSRFLRRRGRVRRLKYTWKSAAYHSIRKRITERKDQPCRQYNPCGCQSACGKQCPCLQNGTCCEKYCGCPKSCKNRFRGCHCAKSQCRSRQCPCFAADRECDPDVCRNCWVGCGDGTLGIPSQRGDNYECRNMKLLLKQQQRVLLGTSDVSGWGAFLKNSVGKHEYLGEYTGELISHREADKRGKIYDRENSSFLFNLNDQFVLDAYRKGDKLKFANHSPDPNCYAKVIMVAGDHRVGIFAKERINAGEELFYDYRYEPDRAPAWARKPEASGSKKDDGAPSSGRAKKLA 860
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g00138 860 SMART set_7 711 832 IPR001214 GO:0005515
Accr10g00138 860 ProSiteProfiles SET domain profile. 711 826 IPR001214 GO:0005515
Accr10g00138 860 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 1 860 IPR025778 GO:0031519
Accr10g00138 860 MobiDBLite consensus disorder prediction 834 860 - -
Accr10g00138 860 Coils Coil 195 215 - -
Accr10g00138 860 CDD SET_EZH 711 827 - -
Accr10g00138 860 MobiDBLite consensus disorder prediction 834 853 - -
Accr10g00138 860 Pfam SET domain 722 825 IPR001214 GO:0005515
Accr10g00138 860 MobiDBLite consensus disorder prediction 381 417 - -
Accr10g00138 860 Pfam CXC domain 649 680 IPR041355 -
Accr10g00138 860 SMART CXC_2 645 682 IPR033467 -
Accr10g00138 860 MobiDBLite consensus disorder prediction 1 38 - -
Accr10g00138 860 Gene3D SET domain 611 828 IPR046341 -
Accr10g00138 860 ProSiteProfiles CXC domain profile. 597 696 IPR026489 -
Accr10g00138 860 MobiDBLite consensus disorder prediction 348 430 - -
Accr10g00138 860 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) 30 858 IPR045318 GO:0006338|GO:0042054
Accr10g00138 860 FunFam Putative histone-lysine N-methyltransferase EZH2 611 828 - -
Accr10g00138 860 SUPERFAMILY SET domain 585 831 IPR046341 -
Accr10g00138 860 MobiDBLite consensus disorder prediction 438 457 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g00138 Accr-Chr10 2480640 2490078 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g00138 700 829 C2H2 Transcription Factor Family AT2G23740 26.531 6.97e-09 57.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Accr10g00138 SET 4.8e-11 No_clan