Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g00132 ATGATGAACCATCAAGGGGGAATGAGTCACTCAAATTGTAATGCTAACAACCAGAACAAGGTTAATCATCAGTCAACTGGAGCACTGGAATTTCTTCCTACCGCAAGTTCCCTTACTGCAGGAGGATATCAAAGGTTCCCTGATCAGGTTTTGGGGTCAAATCATGTCAGTCCAAGTATTGGTTGCAATGCAGGTGTTGCTCCTCAAAATGTTGACTCAGGTGCAGAATATGCTGGGAACAATTGTTACAACAATTTGGATGTGTCTTTGACTTTAGGCCTTCATTCCTATGGACCAGAACATGAGAATACCAGCAACTCTTATACAACTGAAATCGATCATGGAAGATCAAGTTCTACAGTGCAAGAGCAAGGTTTGAATAGCAGCTCAATGTATATGAGGCGTTTATCCTGCAAGAGAAAGTCTCCTGAACATACTGTCAGAGAATTGTTAGTAGGTGAGAGTTCTAGCTCAGCTGCACATACTGGAACTTCCAAACGGCAGGCTTCTGAAGCCTATGGCAGCAACGGCCTAAACATATCTACTCCTTATACTAGTCCTGTCAGTCACCAGGAACAGTCTGAGACCATTATTTGTCATGGCACTATAACGCCGGTTTCTGATATGCAGCATTTGAACAGAGCCAGACTATCTGAAAACTTCCAAAGTAACATTCATCATCATACAGCTGCAAATCAACAAGCTTTTCTACCAACCAGCGTTTTGTCATCAGGTTACATGAGGAATGCTCATGTCCAGTTACCCAGTCAGTCACCTTTGTATGGTCAAGACAACTATCCCCCTTTCTTCAGGCCTGCAGAAAGAGTTATAAGTCCAATTTCGTCAGTGCAGCCTGATGAGCATGTTCCTTATTTTCATGAAACTTCACAGGCTCCCCCCTGTATTCATATGATGAGATCAAGTAGTGGTTTTTCTTCATTTTTGCCTGTCTATACTGCAGCAGAAAGGGCGGCTGTGGCACCCTTTCATTACCCAAGAAACATAAATGAAAACATCATGCTTAGCCACCAAATTGGAAGGAGAAATTGGGCACATGATGCAAGAAACTCGCACTTTGTGGATGAAACTGCAAACTTCCCTGGAAATTTTTTCTGCCCCCATCATGGTTTTGTTCCTGATACGATCCATTCAGCAAATGCCCCTGTTTCCTTCACAGGGTTAAATTTTGCTGATCCCTATGCACTGACAACATCAAGAATTGTGAATCATCCTGTGTTTGGAACTACTGGTTTCCCATGGCATAGTTACAGCCTAGCAGAAGTAGTTTTGCATGAAATGGGCTATTTTGGATTTGGTAACTTTCTATCTCAGAATCAGCATATATCGGGAGCAAGATCTGAGAACCATGCTGCTTATTATACATGGTCACTTGCTAATGCTCAAATTAGTAGGGGGCTGATGCCTGAGGATCTGCGTACATCAGAAGCAAGATTCGAGAATCAAGATATTTATCACCTTTATCATTATTTTTGGACACCTGCTAATGCTCAAAATAGAAGGAGGCTGAGTCTTGAGCTTCACCATCACCTGATACTTCTGCACAGTGCTGACCCGTCACGGCCTGTGATCATTCCACCGGAATTGAGGATGTTGGACCATTCAGTTGTAACGGATTTAGTTATGGGGCTTCACAATGAATATGAACCGCATTTAGACTCAGACAACTGGAATAATGAGCTTCAGGATGCTGGCGGACCGGAGGAGGGGCTGAGTGAGGAAATGGTTCTCGGCCAGCTTAGGCAGGAAAAATTCCAGTCCACCCCAGATGGGTCTGAGGAAAATGAATGCTGCTGCATTTGTCAGGAAGAGTACCAAGAAGATGAAGATCTGGGTAAGCTGTGGTGCGGCCACAGGTTTCATGCAGACTGTATCAAGCCATGGCTGGTGCTGAAGAACGTCTGCCCCATTTGCAAACAAACTGCACTTCCTATTTGTGATGGTTCTCTTTAA 1971 0.4373 MMNHQGGMSHSNCNANNQNKVNHQSTGALEFLPTASSLTAGGYQRFPDQVLGSNHVSPSIGCNAGVAPQNVDSGAEYAGNNCYNNLDVSLTLGLHSYGPEHENTSNSYTTEIDHGRSSSTVQEQGLNSSSMYMRRLSCKRKSPEHTVRELLVGESSSSAAHTGTSKRQASEAYGSNGLNISTPYTSPVSHQEQSETIICHGTITPVSDMQHLNRARLSENFQSNIHHHTAANQQAFLPTSVLSSGYMRNAHVQLPSQSPLYGQDNYPPFFRPAERVISPISSVQPDEHVPYFHETSQAPPCIHMMRSSSGFSSFLPVYTAAERAAVAPFHYPRNINENIMLSHQIGRRNWAHDARNSHFVDETANFPGNFFCPHHGFVPDTIHSANAPVSFTGLNFADPYALTTSRIVNHPVFGTTGFPWHSYSLAEVVLHEMGYFGFGNFLSQNQHISGARSENHAAYYTWSLANAQISRGLMPEDLRTSEARFENQDIYHLYHYFWTPANAQNRRRLSLELHHHLILLHSADPSRPVIIPPELRMLDHSVVTDLVMGLHNEYEPHLDSDNWNNELQDAGGPEEGLSEEMVLGQLRQEKFQSTPDGSEENECCCICQEEYQEDEDLGKLWCGHRFHADCIKPWLVLKNVCPICKQTALPICDGSL 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g00132 656 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 567 649 IPR013083 -
Accr10g00132 656 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF165 103 649 IPR045191 GO:0061630
Accr10g00132 656 MobiDBLite consensus disorder prediction 1 20 - -
Accr10g00132 656 SUPERFAMILY RING/U-box 599 650 - -
Accr10g00132 656 MobiDBLite consensus disorder prediction 152 174 - -
Accr10g00132 656 ProSiteProfiles Zinc finger RING-type profile. 604 645 IPR001841 -
Accr10g00132 656 SMART ring_2 604 644 IPR001841 -
Accr10g00132 656 Pfam Ring finger domain 604 645 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g00132 Accr-Chr10 2419878 2424238 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g00132 535 649 C3H Transcription Factor Family AT2G15530 43.411 1.01e-22 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g00132 - - pcin:129295749 786.949