Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g00131 ATGATGAACCATCAAGGGGGAATGAGTCACTCAAATTGTAATGCTAACAACCAGAACAAGGTTAATCATCAGTCAACTGGAGCACTGGAATTTCTTCCTACCGCAAGTTCCCTTACTGCAGGAGGATATCAAAGGTTCCCTGATCAGGTTTTGGGGTCAAATCATGTCAGTCCAAGTATTGGTTGCAATGCAGGTGTTGCTCCTCAAAATGTTGACTCAGGTGCAGAATATGCTGGGAACAATTGTTACAACAATTTGGATGTGTCTTTGACTTTAGGCCTTCATTCCTATGGACCAGAACATGAGAATACCAGCAACTCTTATACAACTGAAATCGATCATGGAAGATCAAGTTCTACAGTGCAAGAGCAAGGTTTGAATAGCAGCTCAATGTATATGAGGCGTTTATCCTGCAAGAGAAAGTCTCCTGAACATACTGTCAGAGAATTGTTAGTAGGTGAGAGTTCTAGCTCAGCTGCACATACTGGAACTTCCAAACGGCAGGCTTCTGAAGCCTATGGCAGCAACGGCCTAAACATATCTACTCCTTATACTAGTCCTGTCAGTCACCAGGAACAGTCTGAGACCATTATTTGTCATGGCACTATAACGCCGGTTTCTGATATGCAGCATTTGAACAGAGCCAGACTATCTGAAAACTTCCAAAGTAACATTCATCATCATACAGCTGCAAATCAACAAGCTTTTCTACCAACCAGCGTTTTGTCATCAGGTTACATGAGGAATGCTCATGTCCAGTTACCCAGTCAGTCACCTTTGTATGGTCAAGACAACTATCCCCCTTTCTTCAGGCCTGCAGAAAGAGTTATAAGTCCAATTTCGTCAGTGCAGCCTGATGAGCATGTTCCTTATTTTCATGAAACTTCACAGGCTCCCCCCTGTATTCATATGATGAGATCAAGTAGTGGTTTTTCTTCATTTTTGCCTGTCTATACTGCAGCAGAAAGGGCGGCTGTGGCACCCTTTCATTACCCAAGAAACATAAATGAAAACATCATGCTTAGCCACCAAATTGGAAGGAGAAATTGGGCACATGATGCAAGAAACTCGCACTTTGTGGATGAAACTGCAAACTTCCCTGGAAATTTTTTCTGCCCCCATCATGGTTTTGTTCCTGATACGATCCATTCAGCAAATGCCCCTGTTTCCTTCACAGGGTTAAATTTTGCTGATCCCTATGCACTGACAACATCAAGAATTGTGAATCATCCTGTGTTTGGAACTACTGGTTTCCCATGGCATAGTTACAGCCTAGCAGAAGTAGTTTTGCATGAAATGGGCTATTTTGGATTTGGTAACTTTCTATCTCAGAATCAGCATATATCGGGAGCAAGATCTGAGAACCATGCTGCTTATTATACATGGTCACTTGCTAATGCTCAAATTAGTAGGGGGCTGATGCCTGAGGATCTGCGTACATCAGAAGCAAGATTCGAGAATCAAGATATTTATCACCTTTATCATTATTTTTGGACACCTGCTAATGCTCAAAATAGAAGGAGGCTGAGTCTTGAGCTTCACCATCACCTGATACTTCTGCACAGTGCTGACCCGTCACGGCCTGTGATCATTCCACCGGAATTGAGGATGTTGGACCATTCAGTTGTAACGGATTTAGTTATGGGGCTTCACAATGAATATGAACCGCATTTAGACTCAGACAACTGGAATAATGAGGATGCTGGCGGACCGGAGGAGGGGCTGAGTGAGGAAATGGTTCTCGGCCAGCTTAGGCAGGAAAAATTCCAGTCCACCCCAGATGGGTCTGAGGAAAATGAATGCTGCTGCATTTGTCAGGAAGAGTACCAAGAAGATGAAGATCTGGGTAAGCTGTGGTGCGGCCACAGGTTTCATGCAGACTGTATCAAGCCATGGCTGGTGCTGAAGAACGTCTGCCCCATTTGCAAACAAACTGCACTTCCTATTTGTGATGGTTCTCTTTAA 1965 0.4372 MMNHQGGMSHSNCNANNQNKVNHQSTGALEFLPTASSLTAGGYQRFPDQVLGSNHVSPSIGCNAGVAPQNVDSGAEYAGNNCYNNLDVSLTLGLHSYGPEHENTSNSYTTEIDHGRSSSTVQEQGLNSSSMYMRRLSCKRKSPEHTVRELLVGESSSSAAHTGTSKRQASEAYGSNGLNISTPYTSPVSHQEQSETIICHGTITPVSDMQHLNRARLSENFQSNIHHHTAANQQAFLPTSVLSSGYMRNAHVQLPSQSPLYGQDNYPPFFRPAERVISPISSVQPDEHVPYFHETSQAPPCIHMMRSSSGFSSFLPVYTAAERAAVAPFHYPRNINENIMLSHQIGRRNWAHDARNSHFVDETANFPGNFFCPHHGFVPDTIHSANAPVSFTGLNFADPYALTTSRIVNHPVFGTTGFPWHSYSLAEVVLHEMGYFGFGNFLSQNQHISGARSENHAAYYTWSLANAQISRGLMPEDLRTSEARFENQDIYHLYHYFWTPANAQNRRRLSLELHHHLILLHSADPSRPVIIPPELRMLDHSVVTDLVMGLHNEYEPHLDSDNWNNEDAGGPEEGLSEEMVLGQLRQEKFQSTPDGSEENECCCICQEEYQEDEDLGKLWCGHRFHADCIKPWLVLKNVCPICKQTALPICDGSL 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g00131 654 SMART ring_2 602 642 IPR001841 -
Accr10g00131 654 Pfam Ring finger domain 602 643 IPR001841 -
Accr10g00131 654 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF165 103 647 IPR045191 GO:0061630
Accr10g00131 654 MobiDBLite consensus disorder prediction 1 20 - -
Accr10g00131 654 ProSiteProfiles Zinc finger RING-type profile. 602 643 IPR001841 -
Accr10g00131 654 MobiDBLite consensus disorder prediction 152 174 - -
Accr10g00131 654 SUPERFAMILY RING/U-box 597 648 - -
Accr10g00131 654 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 564 647 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g00131 Accr-Chr10 2419878 2424238 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g00131 535 647 C3H Transcription Factor Family AT2G15530 43.411 5.49e-23 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g00131 - - pcin:129295749 778.859