Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g00101 ATGGGTCTCTGTACTTCAAAGCCCTCAGCGAATCTCACATCTGCTTCTCCCAAATCTGAAACTGAATCGCCCAGGAATAACCATGTGCCACCTAGAGATGACTCTGTGCCTGTTAATGACTGTCCTCAACCTCATTCGAGCACTTTGAACGGAGAAAACCCTAGCAAGGAGAAGAAAGAGGCGGAGAATTGTAAAAGATCGCCTTTCTTCCCGTTTTACAGCCCAAGTCCGGCACACTATTTGTTCTCGAAGAAGTCTCCGGCGAGATCTCCGGCGAATGGGAGCTCGAACTCCACGCCGAGGAGGCTTCTCAAACGTCCGTTCCCACCTCCGTCGCCGGCTAAGCACATAAAAGCTCTGCTCGCTAGGCGGCATGGGTCGGTGAAGCCGAATGAGGCAACGATACCAGAAGGGAGCGAAGCAGAGGTGGTTACTGGTCTTGATAAGAGTTTTGGATTCTCAAAGCATTTCGGGAACAAGTATGAATTAGGAGATGAGGTTGGGAGAGGTCACTTTGGTTACACTTGTGCTGCCAAGTTTAAGAAGGGCGAGCTCAAGGGGCAACAGGTGGCTGTGAAAGTTATCCCGAAAGCAAAGATGACCACTGCCATTGCTATTGAGGATGTGAGAAGAGAAGTAAAAATATTGAGAGCTTTAACAGGACATAAGAATCTTGTGCAATTCTATGATGCATACGAAGACCATGATAATGTCTATATAGTAATGGAGTTGTGTGAAGGAGGGGAGCTGTTGGACAGAATACTATCAAGAGGTGGAAAATACTCAGAGGATGATGCAAAAGCTGTAATGATACAAATACTTAATGTTGTTGCATTCTGCCATTTCCAGGGTGTTGTGCACCGCGATCTTAAACCTGAGAATTTCTTGTTTACGTCGAAGGATGAAAACTCAGAGCTGAAGGCTATAGATTTTGGATTGTCAGATTTTGTAAAACCAGATGAAAGACTTAATGATATTGTTGGCAGTGCATACTATGTGGCTCCTGAAGTTCTACATCGATCTTACACCACAGAGGCTGATGTCTGGAGTATTGGTGTGATTGCATATATTCTTCTATGTGGAAGCCGTCCATTTTGGGCCCGGACTGAGTCTGGAATCTTTCGTACTGTATTGAAATCTGATCCAACTTTTGATGAACCTCCTTGGCCTTCTCTATCAGCTGAGGCAAAAGACTTTGTTAAACGGCTACTTATTAAAGATCCACGGAAAAGAATGACGGCTGCACAGGCATTAAGTCATCCCTGGATTAAAAATTACAAGGATGTAAAAGTACCTTTGGATATTCTAATATTCAAGCTCATGAAGGCATACATGCGTTCCTCATCTCTACGGAAAGCAGCTTTAAGGGCACTGTCTAAGACATTAACCGCAGATGAGCTATTTTATTTGAAGGAGCAGTTTACACTTTTAGAGCCCAACAAAAATGGTGCTATAAGTTTGGAAAGCATCAAAGCGGTCTTGACGAAAAATGCTACAGATGCCATGAAAGAGTCACGCATTCCCGACTTTCTGGCATCACTCAATGCATTGCAATATAGAAAGATGGATTTTGACGAGTTCTGTGCAGCTGCACTTAGTGTTCATCAACTTGAAGCACTTGGCCAGTGGGAGCAGCAGGCTCGCTGTGCCTATGATCATTTTGAAAAAGATGGAAACCGTGCTATCGTCATTGAGGAACTAGCTTCGGAACTTTGCCTTGGCCCATCTGTCCCTGTTCATGCTGTCCTTCATGATTGGATTAGACACACTGATGGAAAGTTAAGCTTCCTTGGTTTTGTCAAATTGTTGCATGGACCATCTCGAAGTCTCGCTAAGGTTCAATAG 1845 0.4434 MGLCTSKPSANLTSASPKSETESPRNNHVPPRDDSVPVNDCPQPHSSTLNGENPSKEKKEAENCKRSPFFPFYSPSPAHYLFSKKSPARSPANGSSNSTPRRLLKRPFPPPSPAKHIKALLARRHGSVKPNEATIPEGSEAEVVTGLDKSFGFSKHFGNKYELGDEVGRGHFGYTCAAKFKKGELKGQQVAVKVIPKAKMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDHDNVYIVMELCEGGELLDRILSRGGKYSEDDAKAVMIQILNVVAFCHFQGVVHRDLKPENFLFTSKDENSELKAIDFGLSDFVKPDERLNDIVGSAYYVAPEVLHRSYTTEADVWSIGVIAYILLCGSRPFWARTESGIFRTVLKSDPTFDEPPWPSLSAEAKDFVKRLLIKDPRKRMTAAQALSHPWIKNYKDVKVPLDILIFKLMKAYMRSSSLRKAALRALSKTLTADELFYLKEQFTLLEPNKNGAISLESIKAVLTKNATDAMKESRIPDFLASLNALQYRKMDFDEFCAAALSVHQLEALGQWEQQARCAYDHFEKDGNRAIVIEELASELCLGPSVPVHAVLHDWIRHTDGKLSFLGFVKLLHGPSRSLAKVQ 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g00101 614 ProSitePatterns Protein kinases ATP-binding region signature. 167 193 IPR017441 GO:0005524
Accr10g00101 614 ProSitePatterns Serine/Threonine protein kinases active-site signature. 285 297 IPR008271 GO:0004672|GO:0006468
Accr10g00101 614 Gene3D - 463 532 - -
Accr10g00101 614 MobiDBLite consensus disorder prediction 1 68 - -
Accr10g00101 614 FunFam CDPK-related kinase 3 153 325 - -
Accr10g00101 614 MobiDBLite consensus disorder prediction 88 102 - -
Accr10g00101 614 SMART serkin_6 161 423 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr10g00101 614 FunFam Calcium-dependent protein kinase SK5 333 428 - -
Accr10g00101 614 Gene3D Phosphorylase Kinase; domain 1 154 249 - -
Accr10g00101 614 MobiDBLite consensus disorder prediction 83 114 - -
Accr10g00101 614 Gene3D Transferase(Phosphotransferase) domain 1 250 435 - -
Accr10g00101 614 SUPERFAMILY EF-hand 451 605 IPR011992 -
Accr10g00101 614 ProSiteProfiles Protein kinase domain profile. 161 423 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr10g00101 614 MobiDBLite consensus disorder prediction 1 24 - -
Accr10g00101 614 CDD STKc_CAMK 160 422 - -
Accr10g00101 614 Gene3D - 441 602 - -
Accr10g00101 614 FunFam CDPK-related kinase 1 154 249 - -
Accr10g00101 614 FunFam CDPK-related kinase 1 459 532 - -
Accr10g00101 614 SUPERFAMILY Protein kinase-like (PK-like) 158 451 IPR011009 -
Accr10g00101 614 PANTHER SERINE/THREONINE-PROTEIN KINASE 140 589 - -
Accr10g00101 614 Pfam Protein kinase domain 161 423 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g00101 Accr-Chr10 1618012 1622826 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g00101 1 614 EF-hand Containing Proteins AT3G50530 73.839 0.0 967
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Accr10g00101 Pkinase 1.6e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g00101 K13412 - cave:132186080 1028.08