Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g00095 ATGTCGTCATCAAAAACACCGTGTGCAGCGTGCAAGCTGCAGAGGAGAAAATGCACGCCAGAATGCGTGTTTGCACCCTACTTCCCGCCGGACATCCCACAAAAGTTTCAGAACGTACACCAGGTGTTCGGCGCAAGCAATGTGTCAAAGATTCTGACAGATCTGGATGTGGCGCAACGTGAAGAAGCTGTGAGGTCATTGGCTTACGAAGCAGATAAACGGATCCAAGACCCAGTGTACGGCTGTGTGGGCCACATCGCTTATTTGCAAAAGAAGCTGAGGCACCTAACAAATGAAATTGACAAAGCCAATAAGGAGATTGCTCTTTATGAAGGTAACCATGGTTTTCAGCCCTTCCTGGTTCCTAGTTTAGACGCTCATCATGCTGGAACAACCAACAATATTGTTTATGGTCCCTCCTCCGTTTACCCCTACACTAACATGCCGCCACAGGCCATGATGGCCGCGCATGGCGGTGGAAATTTGGTTATATGTGATCCTCAGCAGCAGTTAGTGGCGGGTGATATAGACTTGAGGCAGGTGCAAGAGTTGTATGGGATTTATGATCAGCACCAGCAACCGCCTCCGCCACAGAAAGACTTTATGAGTTACGGTGGCGGTGGATCGGTTTCTGGGAGCGGATTTAATCAAGCTGCAGAGATTTCGGCTTCATTAGCTCTGAACACATTTGACAACTCTTATCAATCCGTGCAACTTCATGGAGGCCAAGGAGGGGATTGTCATCAACCGCAACAGAATCAGTACCATCATAACCATAATCTCCAAGAGCAGCTGCCGCGGCTGCAGCACCATAAACTTCAAGAATCATTGCAGCAACCGCAACAGCTTCAACAACAGCCTCAGCACCATCATCTTCAGAAGCAGATGCTTCTACAACCACAACCTCAACACCAGGAGCAATCGAAAGATACTTGA 936 0.485 MSSSKTPCAACKLQRRKCTPECVFAPYFPPDIPQKFQNVHQVFGASNVSKILTDLDVAQREEAVRSLAYEADKRIQDPVYGCVGHIAYLQKKLRHLTNEIDKANKEIALYEGNHGFQPFLVPSLDAHHAGTTNNIVYGPSSVYPYTNMPPQAMMAAHGGGNLVICDPQQQLVAGDIDLRQVQELYGIYDQHQQPPPPQKDFMSYGGGGSVSGSGFNQAAEISASLALNTFDNSYQSVQLHGGQGGDCHQPQQNQYHHNHNLQEQLPRLQHHKLQESLQQPQQLQQQPQHHHLQKQMLLQPQPQHQEQSKDT 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g00095 311 MobiDBLite consensus disorder prediction 273 305 - -
Accr10g00095 311 ProSiteProfiles LOB domain profile. 6 107 IPR004883 -
Accr10g00095 311 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 4 289 - -
Accr10g00095 311 Coils Coil 86 113 - -
Accr10g00095 311 MobiDBLite consensus disorder prediction 273 311 - -
Accr10g00095 311 Pfam Lateral organ boundaries (LOB) domain 7 104 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g00095 Accr-Chr10 1509980 1510915 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g00095 1 122 AS2 family AT5G66870 59.836 1.35e-47 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Accr10g00095 LOB 5.1e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g00095 - - pcin:129311998 296.589