Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g00079 ATGTTTCGCCACCAGAAAAAGTACGTTGCCATCATGCTCACCATCATAATCTTCACTACGAGAGCCGAAAAGTCGAACTCATGCGAACGCACATGCGGAGGATATGCCATACAGTACCCTTTTGGGTTCTCTGAAGGTTGTGATATCAAACTAAACTGCAGTTCTAGCAATGGCATGGAAATCGGAGGATTACGAGTCAATAAAGTAACCTCCAGCAGTATCTTCATCGATGTTCCTTGGAAATGCAACCGAAGTATGCAAGTAATCCGATCCCTTTTCAGCAACAACTTCGCTCCTACACGGAACAACAGCTTTATCTTGCAAGCTGGTTCATCTACGCTTGGCTGTGGTGTGCCCGCTACCAGCCTAGTTGGTAATCAAACTGAGTTAGAGGATTGCAGTAAAGAAGGTCATATTATCAGCTTCTTCACGATCGTTCATAGAAAGAATAATGAATCGGATGTTGTAAGCTATGAGGAAGTGAATCGAAATCAGTGCAAGTTCTGGTTCTCCGCCATTGCTTTTGACCCGGCGGTTTCGGGGCAGTTTCAGATGCTTGAATTAGGTTGGTGGCTTCAATACCCGTGCCCTTGCCACAGTGATGCAAAGTGTAAAGAGGTTCATCTCGCCGACGGCAAGCTCGGCTTCCGGTGCCACTGCCCTGAAAATTACGTCGGAGATGGCTACCAAAATGGCACCGGTTGTCTCATATGTGCTAAAAATGACTACTATTGCAAGCACCTTACATCCAAACTTGGGAAAGTTGGTGGAGGGATTTCGGTTGTACTTTTTCTGGGACTTCTTGCGTGGTTACTATATGACAACATCCTGCGGAGTTTGAGAAAGAAAGCAGAGAAGCTGTTACGTGAAGTTTTAGGTAATTCTAGTCTTGTAGTCTACCCGTACAACGAAATCGAAGCAGCCACTAATTCTTTCTCTGACCAACGGAAGCTGGGATCTGGGGCGTTTGGCACAGTTTATTTGGGGAAACTTCACAATCAATGGGTTGCAATAAAAAAGATAAAGAGTCGAGATAATAATAACGTTGTCCATGTCATAAATGAGATCAAGCTCCTTTCTCTTGTGAGTCACCCAAATTTAGTCCGTATCTTGGGTTGCTGGATAGGAGAAACTAAGCAGATAATCGTTTTCGAATTTGTGCCCAATGGAACACTATCTCAGCATTTACAAAGGCAAAAGAGTAATGTACTTCCATGGATAACAAGGCTCACCATTGCTTCTGAAACTGCCAATGCTATAGCATATCTGCATTCTGCCATTGATCCTCCAATCTACCACAGAGACATAAAGTCCAGCAATATACTGCTGGATTACGACTTCAAATCAAAAGTGGCAGATTTTGGGCTTTCTAGGCTTGGCTTAGCAGACATATCACATATCTCCACTGGTCCACGAGGGACACCGGGTTATGTTGACCCTTCATATGAGCACAATTTCCACCTCTCTGACAAGAGTGATGTCTATAGTTTTGGGGTGGTTTTAGTAGAGATAATAACTGCCCTGAAAGTGGTTGATTTTTCTCGACCTCAGAATGAGGTTAATTTGGCTGCACTTGCAGTTGATAGGATTGGAAGGGGTTGTGTGGAGGAGATAGTGGATCCTTTACTGTCATCACATGAGGATGAATGGACCAACTATTCTGTTCACAAGGTGGCCGAACTCGCATTTAGATGCCTTGATTCACGAAGAGACATCAGGCCTGCTATGATGGAGGTGGCAGAGGAGTTAGAATACATCAAAAGCAGTGGATGCAATAAAATGGAGGAAACGACATGCACCACATCACCAGGTACCTCTCATATTCATGAGAACGTAAGAACTCAGACTTTGACTGTTCCTGCAGATGGATAA 1872 0.4407 MFRHQKKYVAIMLTIIIFTTRAEKSNSCERTCGGYAIQYPFGFSEGCDIKLNCSSSNGMEIGGLRVNKVTSSSIFIDVPWKCNRSMQVIRSLFSNNFAPTRNNSFILQAGSSTLGCGVPATSLVGNQTELEDCSKEGHIISFFTIVHRKNNESDVVSYEEVNRNQCKFWFSAIAFDPAVSGQFQMLELGWWLQYPCPCHSDAKCKEVHLADGKLGFRCHCPENYVGDGYQNGTGCLICAKNDYYCKHLTSKLGKVGGGISVVLFLGLLAWLLYDNILRSLRKKAEKLLREVLGNSSLVVYPYNEIEAATNSFSDQRKLGSGAFGTVYLGKLHNQWVAIKKIKSRDNNNVVHVINEIKLLSLVSHPNLVRILGCWIGETKQIIVFEFVPNGTLSQHLQRQKSNVLPWITRLTIASETANAIAYLHSAIDPPIYHRDIKSSNILLDYDFKSKVADFGLSRLGLADISHISTGPRGTPGYVDPSYEHNFHLSDKSDVYSFGVVLVEIITALKVVDFSRPQNEVNLAALAVDRIGRGCVEEIVDPLLSSHEDEWTNYSVHKVAELAFRCLDSRRDIRPAMMEVAEELEYIKSSGCNKMEETTCTTSPGTSHIHENVRTQTLTVPADG 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g00079 623 ProSitePatterns Protein kinases ATP-binding region signature. 318 340 IPR017441 GO:0005524
Accr10g00079 623 SMART serkin_6 312 586 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr10g00079 623 ProSitePatterns Serine/Threonine protein kinases active-site signature. 431 443 IPR008271 GO:0004672|GO:0006468
Accr10g00079 623 SUPERFAMILY Protein kinase-like (PK-like) 292 585 IPR011009 -
Accr10g00079 623 ProSiteProfiles Protein kinase domain profile. 312 586 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr10g00079 623 Pfam Protein kinase domain 313 580 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr10g00079 623 Gene3D Phosphorylase Kinase; domain 1 292 386 - -
Accr10g00079 623 Gene3D Transferase(Phosphotransferase) domain 1 387 605 - -
Accr10g00079 623 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 17 604 IPR044652 GO:0004672
Accr10g00079 623 FunFam Wall-associated receptor kinase-like 20 387 596 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g00079 Accr-Chr10 1272452 1276401 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g00079 1 590 Receptor kinase-like Gene Family AT2G23450 46.895 0.0 548
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Accr10g00079 Pkinase 5e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g00079 - - pcin:129311319 681.019