Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g00070 ATGGGATTAGCAACCCCGCCAGTGCTTCCGCCGACTCTTTCTCACTCCGGCAAGCCCCACCATTCATTTTCCTCCATAATAGACTCCAATTCTATGTCCCAAGATTATCACCAAGGAATCTTCACCTTCGAGAGACCCACAACTCTAACTCAGCAACAGCAGCAGCAGCAGCACCAGTTAGCGCAGCAGATCCGGAGAGACAAGGTGAGGGTGCAAGCGGGGTTGGACCCGCCGCCGCCGCTTGTGGGTATTGAGGAAGAAGAATCTGGAAACCTTCCCGTTTATGAAACCGGCGGGATGTTATCGGAGATGTTCAATTTCCCTCCTCCCGGCGCCACCGCCACTGAATTGTTGGAACAACAACATCAACCGGCTGCGGCCATGTATCGGACCGCCAGGCCGCAACCGGTGGCCACGGATTGGTACAGACAAGGGATGTTAAGTGGGTTGGGAGATTCAAAGAATCAGGATAGCCGTGACAATACTAGTATACTAGAACAACACCACCACCACCATCATCATCATCCTCAGATTTCAAGTATGAATGCGGACTCAGCCGCCGCCATGCAGCTTTTTCTTATGAACCCGCAAACAAGATCGCCTTCTCCGGCGACTCAAAGCCACACTCCTAATTCAACTTCTCTGCAAGGCTTCAGTACACAGGGAGGGGGTTTTGGTCCATTCACATGGGTCCCTCATAGCTCTCAGCCAGGAGCGGCGGGAGGTAATCCACCACCACAAATTGGAGGGGTTATGGAAGCTCAGGGGCTTTCGTTATCATTGTCGTCGTCGCTGCAACATTTGGAAGCGGCGAAAGCCGAGGAATTGAGGATGGGAGAGAGTGGGTTTCTGTATTACAATCAAGGATCCGGAGGAGGAGGGTCTTCTTCGTCTGGTGGTGGTCAATATCCGTACAAGACATTGCATTTCCAAGGGTCGTCCGTAGTCGGGGCGGGTCAGAACCATGTGGGGTTCGGGTCGTCGTCATCATTAGGGGTGGTGAACGTGCTGAGGAATTCAAAGTACGTGAAAGCTGCACAAGAATTGCTTGAAGAATTCTGTAGTGTTGGGAGAGGTCAGTTCAAGAGGAACAAGTTCACCAGACAAAACTCAAACCCTAGTTCCAATCCTCCTCCTCCAGCCGCTGCCGCTGCTACTGGTTCTTCTTCTTCATCTAAGGATCCTCCTCCTTTATCATCGGCCGATAGGATTGAGCAGCAGAGAAGGAAGGTCAAACTTCTATCCATGCTTGACGAGGTGGATCGGAGATACAACCATTACTGCGAACAAATGCAAATGGTGGTGAACACATTTGACATGGTGATGGGATTCGGGTCGGCGGTGCCATACACGGCCTTAGCTCAGAAGGCAATGTCACGGCATTTCCGGTGCCTGAAGGACGCGATAACCGCGCAGCTCAAGCATAGTTGCGAGCTGCTGGGAGAAAAGGACGGAGCGGGAAGCTCAGGGATAACCAAAGGAGAGACACCAAGGCTGAAGCTTCTAGAACAAAACCTGAGACAGCAGAGAGCCTTCCACCAGATGGGGATGATGGAACAAGAAGCATGGCGACCCCAAAGAGGCCTCCCTGAGAGATCCGTCAACATTTTGCGAGCCTGGCTCTTCGAGCATTTTCTTCATCCGTATCCAAGCGACGCTGATAAGCACCTGTTGGCTCGACAGACTGGTCTCTCCAGAAATCAGGTATCAAACTGGTTCATTAATGCCAGGGTGCGGCTGTGGAAACCTATGATAGAAGAAATGTACCAACAAGAACTTAAGGAAGCTGAAGGAGAAGAGAGAGAAGAAAGAAACCAAAGCAACAACAGCAACCTCCTCGCACAAACTCCAACTACAGCAGCAACAAGCTCAACAGAAGCAGCGCCACCACCATCCACAACAACAACAACGACACTCACAACACCACCAACAACGACACTCACAACAGCAGCAGCAGGCAAAAGATCCCAAATCAATGCTTCTGATAGCGACCCTTCACTCGTTGCAATCAATAATACCCAACCCTTCTCGGAATCCCAACCAAACCTCTCTTCCTCTGCCATCACCACCACTCCAGCCGCCGCACTTGCCGCCTCCTCTGAGGTGGCACCGCCCTCGTCTCAGTGCTATGACTCTGCAGACCTGCTGATGCCCCCTCACAGATCAATGGCCACAGCAGATGACACGTGTCGCAACGGCAGCCTCATTGCAGCTGATTACGGGACCGCCTCTGGTAACTCTGACATTGGTTCTACTCTCATTAGGTTTGGGACCACCGCCGGTGATGTTTCTCTCACCCTAGGGCTTCGCCACGCTGGCAACGTCCCTGAGAAAGCTCCTCCTCCTTTCTCCCTTAGAGACTTCGGAGGCATTTGA 2376 0.5215 MGLATPPVLPPTLSHSGKPHHSFSSIIDSNSMSQDYHQGIFTFERPTTLTQQQQQQQHQLAQQIRRDKVRVQAGLDPPPPLVGIEEEESGNLPVYETGGMLSEMFNFPPPGATATELLEQQHQPAAAMYRTARPQPVATDWYRQGMLSGLGDSKNQDSRDNTSILEQHHHHHHHHPQISSMNADSAAAMQLFLMNPQTRSPSPATQSHTPNSTSLQGFSTQGGGFGPFTWVPHSSQPGAAGGNPPPQIGGVMEAQGLSLSLSSSLQHLEAAKAEELRMGESGFLYYNQGSGGGGSSSSGGGQYPYKTLHFQGSSVVGAGQNHVGFGSSSSLGVVNVLRNSKYVKAAQELLEEFCSVGRGQFKRNKFTRQNSNPSSNPPPPAAAAATGSSSSSKDPPPLSSADRIEQQRRKVKLLSMLDEVDRRYNHYCEQMQMVVNTFDMVMGFGSAVPYTALAQKAMSRHFRCLKDAITAQLKHSCELLGEKDGAGSSGITKGETPRLKLLEQNLRQQRAFHQMGMMEQEAWRPQRGLPERSVNILRAWLFEHFLHPYPSDADKHLLARQTGLSRNQVSNWFINARVRLWKPMIEEMYQQELKEAEGEEREERNQSNNSNLLAQTPTTAATSSTEAAPPPSTTTTTTLTTPPTTTLTTAAAGKRSQINASDSDPSLVAINNTQPFSESQPNLSSSAITTTPAAALAASSEVAPPSSQCYDSADLLMPPHRSMATADDTCRNGSLIAADYGTASGNSDIGSTLIRFGTTAGDVSLTLGLRHAGNVPEKAPPPFSLRDFGGI 791
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g00070 791 CDD homeodomain 523 584 IPR001356 GO:0003677
Accr10g00070 791 MobiDBLite consensus disorder prediction 1 27 - -
Accr10g00070 791 Gene3D - 526 588 - -
Accr10g00070 791 MobiDBLite consensus disorder prediction 607 687 - -
Accr10g00070 791 MobiDBLite consensus disorder prediction 197 245 - -
Accr10g00070 791 MobiDBLite consensus disorder prediction 593 687 - -
Accr10g00070 791 MobiDBLite consensus disorder prediction 197 223 - -
Accr10g00070 791 ProSiteProfiles 'Homeobox' domain profile. 520 583 IPR001356 GO:0003677
Accr10g00070 791 Pfam Homeobox KN domain 540 579 IPR008422 GO:0003677|GO:0006355
Accr10g00070 791 FunFam BEL1-like homeodomain protein 4 526 588 - -
Accr10g00070 791 Pfam Associated with HOX 336 470 IPR006563 -
Accr10g00070 791 MobiDBLite consensus disorder prediction 381 397 - -
Accr10g00070 791 Coils Coil 586 606 - -
Accr10g00070 791 SUPERFAMILY Homeodomain-like 525 590 IPR009057 -
Accr10g00070 791 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 200 607 - -
Accr10g00070 791 SMART HOX_1 523 587 IPR001356 GO:0003677
Accr10g00070 791 MobiDBLite consensus disorder prediction 365 405 - -
Accr10g00070 791 SMART prehox3 331 471 IPR006563 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g00070 Accr-Chr10 1156145 1162781 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g00070 750 791 Homeobox Transcription Factor Family AT2G23760 62.791 1.76e-08 56.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Accr10g00070 POX 9.5e-51 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g00070 - - pcin:129311153 1126.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr9g00262 9 2925021 2930527 Accr10g00070 10 1156145 1162781 CCT
Accr10g00070 10 1156145 1162781 Accr10g00070 10 1156145 1162781 ECH
Accr10g00070 10 1156145 1162781 Accr9g00262 9 2925021 2930527 ECH