Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g00067 ATGGATGTAGCGGAATTAACCTCGGAACAGAAGGTTTTGAGGAGGGATATCCCATGGGAGACCTACATGGCGACTAAGCTGATCTCAAGCACAAGCCTCCAGCTCTTGAGGCGTTATGATCATCGATCACAAAGTCAGAGAGAACAGTTGCTGGATGATGATGGTCCAGCTTATATTCGTGTATTCGTTCATGTTTTGCATGATATTCTTAAAGAGGAGACTGTAGAATATGTTTTGGCATTGGTGGATGAAATGCTCGCAGCAAACCCAAAAAGGGCTAGATTGTTTCATGATAAGTCCCTTGCTGATGTAGACACCTACGAGCCTTTCTTAAGATTGCTCTGGAAAGCGAATTGGTTCATTCAAGAGAAAAGTTGTAAGATCCTCGCTTCAATAGTTAGTGTCCGGCCCAAAAATCAAAATGGCTTTGTTACAAATGGAGAAGCATCAAACTCAAAGAAACCCATTACTACAATCGATGATGTTTTGACAGCATTGGTGAAATGGCTTTGTGAGCAGCTGAGAAAGCCTTCTCATCCTAGTCGTGGCGTCCCAACTGCTGTCAATTGCCTGTCAACCTTACTCAAGGAACCCATGGTTAGGTCTTCCTTTGTTAAAGCAGATGGGGTCAAGTTGCTTGTACCTTTGATTTCACCAGCATCCACTCAACAATCGATTCAGCTTCTTTATGAAACATGCCTCTGCATATGGCTTTTGTCCTATTATGAGCCTGCAATTGAATACTTGGCTACTTCAAGATCCCTTCCGCGACTTATTGATGTCATAAAGAGCTCTACAAAAGAAAAGGTTGTTAGAGTTGTTGCCTTGACTTTTAAGAACTTGCTGTCAAGAGGAACATTGGGTGCTCAAATGGTTGACCTTCAGCTGCTACAAGTTGTTCAGAATTTGAAAGCACAAGCATGGAGTGATGAGGACTTGTTGGAGGCACTAAATTACCTGGAAGAAGGGCTTAGGGATAACATTAAGAAACTAAGTTCTTTTGATATGTACAAGCAAGAAGTTCTTTTGGGCAATCTGGACTGGTCTCCCATGCATAAAGATCCCATTTTTTGGCGAGAAAATATTACCAACTTCGAAGAGAATGACTTCCAGATTCTAAGAGTCCTAATAACAATTTTGGACACGTCTGGGGATCCAAGGGCTCTAGCTGTTGCTTGCTTTGACCTTTCACAGTTCATAAATTACCATTCTGCTGGGAGGGTCATCGTGACGAACCTGAAAGCCAAAGAACGAGTAATGAAATTGATGAATCATGAGAACGCCGAGGTCACTAAAAATGCCTTGTTATGCATCCAAAGGCTTTTCTTAGGTGCCAAGTTTGCAAGCTTCCTGCAGGCTTAG 1362 0.4236 MDVAELTSEQKVLRRDIPWETYMATKLISSTSLQLLRRYDHRSQSQREQLLDDDGPAYIRVFVHVLHDILKEETVEYVLALVDEMLAANPKRARLFHDKSLADVDTYEPFLRLLWKANWFIQEKSCKILASIVSVRPKNQNGFVTNGEASNSKKPITTIDDVLTALVKWLCEQLRKPSHPSRGVPTAVNCLSTLLKEPMVRSSFVKADGVKLLVPLISPASTQQSIQLLYETCLCIWLLSYYEPAIEYLATSRSLPRLIDVIKSSTKEKVVRVVALTFKNLLSRGTLGAQMVDLQLLQVVQNLKAQAWSDEDLLEALNYLEEGLRDNIKKLSSFDMYKQEVLLGNLDWSPMHKDPIFWRENITNFEENDFQILRVLITILDTSGDPRALAVACFDLSQFINYHSAGRVIVTNLKAKERVMKLMNHENAEVTKNALLCIQRLFLGAKFASFLQA 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g00067 453 FunFam V-type proton ATPase subunit H 344 445 - -
Accr10g00067 453 SMART arm_5 197 241 IPR000225 GO:0005515
Accr10g00067 453 SMART arm_5 403 443 IPR000225 GO:0005515
Accr10g00067 453 SMART arm_5 242 283 IPR000225 GO:0005515
Accr10g00067 453 Gene3D - 6 332 IPR011989 -
Accr10g00067 453 Pfam V-ATPase subunit H 8 324 IPR004908 GO:0000221|GO:0046961|GO:1902600
Accr10g00067 453 Pfam V-ATPase subunit H 330 442 IPR011987 GO:0000221|GO:1902600
Accr10g00067 453 PIRSF V-ATP_synth_H 4 451 IPR004908 GO:0000221|GO:0046961|GO:1902600
Accr10g00067 453 SUPERFAMILY ARM repeat 10 443 IPR016024 -
Accr10g00067 453 PANTHER V-TYPE PROTON ATPASE SUBUNIT H 3 452 IPR004908 GO:0000221|GO:0046961|GO:1902600
Accr10g00067 453 Gene3D - 345 445 IPR038497 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g00067 Accr-Chr10 1123008 1131374 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g00067 1 453 Primary Pumps ATPases(2) AT3G42050 75.938 0.0 716
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g00067 K02144 - gmx:100788723 790.03