Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g00066 ATGGATGTAGCGGAATTAACCTCGGAACAGGTTTTGAGGAGGGATATCCCATGGGAGACCTACATGGCGACTAAGCTGATCTCAAGCACAAGCCTCCAGCTCTTGAGGCGTTATGATCATCGATCACAAAGTCAGAGAGAACAGTTGCTGGATGATGATGGTCCAGCTTATATTCGTGTATTCGTTCATGTTTTGCATGATATTCTTAAAGAGGAGACTGTAGAATATGTTTTGGCATTGGTGGATGAAATGCTCGCAGCAAACCCAAAAAGGGCTAGATTGTTTCATGATAAGTCCCTTGCTGATGTAGACACCTACGAGCCTTTCTTAAGATTGCTCTGGAAAGCGAATTGGTTCATTCAAGAGAAAAGTTGTAAGATCCTCGCTTCAATAGTTAGTGTCCGGCCCAAAAATCAAAATGGCTTTGTTACAAATGGAGAAGCATCAAACTCAAAGAAACCCATTACTACAATCGATGATGTTTTGACAGCATTGGTGAAATGGCTTTGTGAGCAGCTGAGAAAGCCTTCTCATCCTAGTCGTGGCGTCCCAACTGCTGTCAATTGCCTGTCAACCTTACTCAAGGAACCCATGGTTAGGTCTTCCTTTGTTAAAGCAGATGGGGTCAAGTTGCTTGTACCTTTGATTTCACCAGCATCCACTCAACAATCGATTCAGCTTCTTTATGAAACATGCCTCTGCATATGGCTTTTGTCCTATTATGAGCCTGCAATTGAATACTTGGCTACTTCAAGATCCCTTCCGCGACTTATTGATGTCATAAAGAGCTCTACAAAAGAAAAGGTTGTTAGAGTTGTTGCCTTGACTTTTAAGAACTTGCTGTCAAGAGGAACATTGGGTGCTCAAATGGTTGACCTTCAGCTGCTACAAGTTGTTCAGAATTTGAAAGCACAAGCATGGAGTGATGAGGACTTGTTGGAGGCACTAAATTACCTGGAAGAAGGGCTTAGGGATAACATTAAGAAACTAAGTTCTTTTGATATGTACAAGCAAGAAGTTCTTTTGGGCAATCTGGACTGGTCTCCCATGCATAAAGATCCCATTTTTTGGCGAGAAAATATTACCAACTTCGAAGAGAATGACTTCCAGATTCTAAGAGTCCTAATAACAATTTTGGACACGTCTGGGGATCCAAGGGCTCTAGCTGTTGCTTGCTTTGACCTTTCACAGTTCATAAATTACCATTCTGCTGGGAGGGTCATCGTGACGAACCTGAAAGCCAAAGAACGAGTAATGAAATTGATGAATCATGAGAACGCCGAGGTCACTAAAAATGCCTTGTTATGCATCCAAAGGCTTTTCTTAGGTGCCAAGTTTGCAAGCTTCCTGCAGGCTTAG 1359 0.4238 MDVAELTSEQVLRRDIPWETYMATKLISSTSLQLLRRYDHRSQSQREQLLDDDGPAYIRVFVHVLHDILKEETVEYVLALVDEMLAANPKRARLFHDKSLADVDTYEPFLRLLWKANWFIQEKSCKILASIVSVRPKNQNGFVTNGEASNSKKPITTIDDVLTALVKWLCEQLRKPSHPSRGVPTAVNCLSTLLKEPMVRSSFVKADGVKLLVPLISPASTQQSIQLLYETCLCIWLLSYYEPAIEYLATSRSLPRLIDVIKSSTKEKVVRVVALTFKNLLSRGTLGAQMVDLQLLQVVQNLKAQAWSDEDLLEALNYLEEGLRDNIKKLSSFDMYKQEVLLGNLDWSPMHKDPIFWRENITNFEENDFQILRVLITILDTSGDPRALAVACFDLSQFINYHSAGRVIVTNLKAKERVMKLMNHENAEVTKNALLCIQRLFLGAKFASFLQA 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g00066 452 Gene3D - 344 444 IPR038497 -
Accr10g00066 452 Pfam V-ATPase subunit H 329 441 IPR011987 GO:0000221|GO:1902600
Accr10g00066 452 Pfam V-ATPase subunit H 5 323 IPR004908 GO:0000221|GO:0046961|GO:1902600
Accr10g00066 452 SUPERFAMILY ARM repeat 9 442 IPR016024 -
Accr10g00066 452 FunFam V-type proton ATPase subunit H 343 444 - -
Accr10g00066 452 PANTHER V-TYPE PROTON ATPASE SUBUNIT H 2 451 IPR004908 GO:0000221|GO:0046961|GO:1902600
Accr10g00066 452 Gene3D - 3 331 IPR011989 -
Accr10g00066 452 PIRSF V-ATP_synth_H 2 450 IPR004908 GO:0000221|GO:0046961|GO:1902600
Accr10g00066 452 SMART arm_5 241 282 IPR000225 GO:0005515
Accr10g00066 452 SMART arm_5 196 240 IPR000225 GO:0005515
Accr10g00066 452 SMART arm_5 402 442 IPR000225 GO:0005515
Accr10g00066 452 Coils Coil 451 452 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g00066 Accr-Chr10 1123008 1131374 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g00066 1 452 Primary Pumps ATPases(2) AT3G42050 76.106 0.0 720