Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g00065 ATGGCGAATCGCTTCTTCCTCTATTCTGCAAATCTTTTTCTTTCAGTAATTCTTATCTTTTCCACTTCACACAGTGCAGCTCAACCACAGAACAAAAACAAAGAAGCAAACTTTTCATGCCCTCTTGATTCACCTTCTTCCTGTGAAACATACGTCTCATACTTTGCTCAGTCTCCCAACTTTCTGAGCATAACCAACATATCTGATTTATTTGGAATCAGTCCTCTTTCAATTGTAAGGGCAAGCAATATAATGTTTGAGGATAACTACAAGCTTATTCCTGGCCAGCTCTTACTTGTACCTGTGACTTGTGGCTGCACAGGAAGTCACTCATTTTCTAACATTTCCTATGTCATGAAGAAAGGTGATACCTACTACTTTGTTTCAACCTTTTCGTTTGAAAATCTCACCAATTGGCAAGCAGTGGAAGCTTCAAATATTAATCTTAATTCAGATATCTTGCCGGTAGGGACCAGTGTGATTTTCCCTTTGTTCTGTAGTTGCCCTTCAAAGACCCAGTTGCAGAAGCGGATCAAGTTTCTAATCACCTATGTGTGGCAGCCCAATGACAATTTGTTCACTGTAAGTTCAAAGTTTAATGCTTCTTCAATGGACATTGTAACCGCAAATAACTATCTGAACTTCACAAATTTAGCCAGCCTTCCAGTTTTGATCCCTGTTAGAAGCTTACCTGCACTTACCCAACCTTACCCTTCATTATCTCTGAACAACCACAAAACAAAGCATCGTCCAATTTTCATTAGTACATTCGTCGGATTTTCTGTTCTGATTGCTCTTTTGGTGATTATACTATATGCTTACCATTTGAGGAAGAAAGGGATGGGTTTGAGTAGGAAAAGTGAAAGTTCGGAGACAGCAGATAAGATACTTTTTGGGGTTTCTTGCTATGTAAGTAAGCCGATCGTGTACGAAGCAGGTGTGATCATGGAAGCTACCAAGAAGCTTAATGAAAGGTACAAGATTGGGAAATCAGTGTACAAAGCCAGAATTGAAGGGCAGGTTGTGGCAGTTAAAAAAGTGAGGGACCAAAATGCGAAGGAGGAGTTAATAATGATGCAGAAGATGAATCATACAAATCTGGTGAAACTAAAGGGAGTCTCTTCATCAGACAATAATGATGGAAATTACTTCCTAGTTTATGAATATGCAGAAAATGGTTCTCTTGATAATTGGCTTTATCCCAGCAGGTATTCTTCAAGCTCTGTGTCTTCTCTCACTTGGAATCAGAGGATAAGCATTGCACTAGATATCGCCATGGGTCTCCAATATCTGCAAGATCACACACAACCAAGAATAGTCCATAGAAACATCACAGCAAGTAACATCCTTCTAGACTCCAAATTCAAGGCCAAGATAGCTAATTTCTCCATGGCAAGAACTTGCACCAATCTTGTGATGCTCAAAATAGACGTTTTTGCATTTGGCGTTGTTCTGTTGGAGTTGCTCACGGGAAAGAAAGGAATGGAAATTAATGAAAAAGGGGAGGTGATGATGTTGTGGAAGGAATTTATGGGGATATTTGATTTTGAAGAGGGAAGAGAAGAGAGACTCAGAAAATGGATGGATCCTGAGCTTGGAAGCTTTTATCCTATTGATGATGCTCTAGGATTGGCTTCTCTTGCTCTAGCTTGCATAGTGGGTGGTAAGTCTATGTCAAGACCAGCCATTGGAGAAATCGTCTTGAGCCTCTCTCTTCTCATTCAATCATCATCTTATGCTTCCTCCTTAAAGGGATCTTCCACATTAGATTTTGACGTCGCTTCCCTAAACAGTCCTATCACAGCTCGTTGA 1812 0.4007 MANRFFLYSANLFLSVILIFSTSHSAAQPQNKNKEANFSCPLDSPSSCETYVSYFAQSPNFLSITNISDLFGISPLSIVRASNIMFEDNYKLIPGQLLLVPVTCGCTGSHSFSNISYVMKKGDTYYFVSTFSFENLTNWQAVEASNINLNSDILPVGTSVIFPLFCSCPSKTQLQKRIKFLITYVWQPNDNLFTVSSKFNASSMDIVTANNYLNFTNLASLPVLIPVRSLPALTQPYPSLSLNNHKTKHRPIFISTFVGFSVLIALLVIILYAYHLRKKGMGLSRKSESSETADKILFGVSCYVSKPIVYEAGVIMEATKKLNERYKIGKSVYKARIEGQVVAVKKVRDQNAKEELIMMQKMNHTNLVKLKGVSSSDNNDGNYFLVYEYAENGSLDNWLYPSRYSSSSVSSLTWNQRISIALDIAMGLQYLQDHTQPRIVHRNITASNILLDSKFKAKIANFSMARTCTNLVMLKIDVFAFGVVLLELLTGKKGMEINEKGEVMMLWKEFMGIFDFEEGREERLRKWMDPELGSFYPIDDALGLASLALACIVGGKSMSRPAIGEIVLSLSLLIQSSSYASSLKGSSTLDFDVASLNSPITAR 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g00065 603 Gene3D Phosphorylase Kinase; domain 1 315 390 - -
Accr10g00065 603 ProSiteProfiles Protein kinase domain profile. 290 603 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr10g00065 603 Gene3D Transferase(Phosphotransferase) domain 1 391 470 - -
Accr10g00065 603 Gene3D Transferase(Phosphotransferase) domain 1 471 587 - -
Accr10g00065 603 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 13 578 - -
Accr10g00065 603 Pfam Protein tyrosine and serine/threonine kinase 339 468 IPR001245 GO:0004672|GO:0006468
Accr10g00065 603 SUPERFAMILY Protein kinase-like (PK-like) 311 531 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g00065 Accr-Chr10 1119265 1121076 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g00065 39 578 Receptor kinase-like Gene Family AT3G21630 29.833 3.11e-63 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Accr10g00065 PK_Tyr_Ser-Thr 1.6e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g00065 - - qsa:O6P43_033758 615.535