Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr10g00063 ATGCCCAGGATACGTCATGGATATGCTCATGTGGCTAACAATCTGTACCAAGGATGGACGCAATACGCCATTGGAGGCAGCATGGAGCCCAGCCTCAAAAGTGAAGCTAACCTCTTCATAGCACCAACCTCAGGGAATAAAGAGGTGACGTGGAGAAAAGGTAGTAATGGAAATGAGGAAGCATTCGAATTTCATTCAGCGAGGGATGTGTTTGAGAATGGAGGTTCCTTCACTGTAACAAAAGGAGGAAGAGTGCCAAAGCCTAATTATAATGCAGAACAAGGATTTAAAGTTGGAGATGCTTCATGTGTTAGGCCAATCACATCAGCAGGCGCATTACGTTGCAGCAAAACCTCAAGGTGCTGA 366 0.4563 MPRIRHGYAHVANNLYQGWTQYAIGGSMEPSLKSEANLFIAPTSGNKEVTWRKGSNGNEEAFEFHSARDVFENGGSFTVTKGGRVPKPNYNAEQGFKVGDASCVRPITSAGALRCSKTSRC 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr10g00063 121 PANTHER PECTATE LYASE 18-RELATED 1 118 IPR045032 GO:0030570
Accr10g00063 121 PRINTS Pollen allergen Amb family signature 62 86 IPR018082 -
Accr10g00063 121 PRINTS Pollen allergen Amb family signature 22 41 IPR018082 -
Accr10g00063 121 SUPERFAMILY Pectin lyase-like 1 106 IPR011050 -
Accr10g00063 121 Gene3D - 1 114 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr10g00063 Accr-Chr10 1107781 1108364 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr10g00063 1 121 Polysaccharide Lyase AT1G30350 43.902 4.58e-25 95.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr10g00063 K01728 - gmx:100811216 193.356